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Pull requests: loculus-project/loculus
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feat(website): Add success toast notification when releasing sequences
preview
Triggers a deployment to argocd
website
Tasks related to the web application
#6175
opened Mar 20, 2026 by
theosanderson
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feat(prepro): add custom lineage functions
preprocessing
Issues related to the preprocessing component
preview
Triggers a deployment to argocd
#6174
opened Mar 20, 2026 by
anna-parker
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3 tasks
feat(preprocessing): move maxSequencesPerEntry validation from backend to preprocessing
backend
related to the loculus backend component
deployment
Code changes targetting the deployment infrastructure
preprocessing
Issues related to the preprocessing component
#6166
opened Mar 19, 2026 by
theosanderson-agent
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5 tasks
chore(deps): bump the patch group across 1 directory with 7 updates
dependencies
Pull requests that update a dependency file
java
Pull requests that update Java code
#6163
opened Mar 19, 2026 by
dependabot
bot
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Allow customization of data use terms agreement text
deployment
Code changes targetting the deployment infrastructure
website
Tasks related to the web application
#6149
opened Mar 17, 2026 by
theosanderson
•
Draft
3 tasks done
chore(silo, lapis, website): update lapis to v0.8.0, silo to v0.11.0
deployment
Code changes targetting the deployment infrastructure
silo/LAPIS
upstream silo/LAPIS issue
#6146
opened Mar 16, 2026 by
anna-parker
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3 tasks done
feat(website, config): add an option for search presets
deployment
Code changes targetting the deployment infrastructure
website
Tasks related to the web application
#6136
opened Mar 13, 2026 by
anna-parker
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3 tasks
feat: Taxonomy service
preview
Triggers a deployment to argocd
#6134
opened Mar 13, 2026 by
maverbiest
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3 tasks done
feat(website, config): create a customDisplay for reference with variant information
deployment
Code changes targetting the deployment infrastructure
preprocessing
Issues related to the preprocessing component
website
Tasks related to the web application
#6133
opened Mar 13, 2026 by
anna-parker
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3 tasks done
testing
deployment
Code changes targetting the deployment infrastructure
#6130
opened Mar 12, 2026 by
anna-parker
•
Draft
3 tasks
feat(prepro): refactor prepro to split up backend internal metadata from customizable metadata fields
preprocessing
Issues related to the preprocessing component
#6071
opened Mar 3, 2026 by
anna-parker
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2 of 3 tasks
theo-exp
deployment
Code changes targetting the deployment infrastructure
#6011
opened Feb 21, 2026 by
theosanderson
•
Draft
feat(preprocessing): preserve attached files through nextclade pipeline
deployment
Code changes targetting the deployment infrastructure
preprocessing
Issues related to the preprocessing component
#6008
opened Feb 19, 2026 by
theosanderson-agent
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2 tasks
Custom lineage functions
preprocessing
Issues related to the preprocessing component
website
Tasks related to the web application
#6004
opened Feb 19, 2026 by
anna-parker
•
Draft
3 tasks
feat(integration-tests): add tests for uncovered UI features
e2e
E2E test related
tests
Test related issues
website
Tasks related to the web application
#5995
opened Feb 17, 2026 by
theosanderson-agent
•
Draft
3 of 4 tasks
demo: use cdk8s for deployment
deployment
Code changes targetting the deployment infrastructure
#5994
opened Feb 17, 2026 by
theosanderson-agent
•
Draft
chore(website): remove zodios dependency and upgrade to zod v4
backend
related to the loculus backend component
website
Tasks related to the web application
#5990
opened Feb 16, 2026 by
theosanderson-agent
•
Draft
5 of 9 tasks
[PoC] Website/field selector modal
website
Tasks related to the web application
#5984
opened Feb 15, 2026 by
rneher
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fix(website): replace unsafe typecasts with runtime typeof checks
website
Tasks related to the web application
#5974
opened Feb 13, 2026 by
theosanderson-agent
•
Draft
2 of 3 tasks
feat(deployment, backend, silo-importer): use incremental update option for silo imports
#5969
opened Feb 12, 2026 by
theosanderson
•
Draft
2 of 3 tasks
[DO NOT MERGE] Test with trusting self-signed certificates
backend
related to the loculus backend component
#5946
opened Feb 5, 2026 by
chaoran-chen
•
Draft
3 tasks
chore(deployment,website,tests): remove dummy pipeline and organisms
deployment
Code changes targetting the deployment infrastructure
e2e
E2E test related
preprocessing
Issues related to the preprocessing component
#5942
opened Feb 4, 2026 by
theosanderson
•
Draft
docs: tips for agents on running integration tests
documentation
Improvements or additions to documentation
e2e
E2E test related
#5884
opened Jan 27, 2026 by
theosanderson
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