A Cloud Native Batch System (Project under CNCF)
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Dec 8, 2025 - Go
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gene
Here are 211 public repositories matching this topic...
Genome annotation with AUGUSTUS
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Aug 15, 2025 - C++
Visualize and annotate genomic coverage with ggplot2
visualization coverage ggplot2 gene track transcripts peak ideogram gc-content base-frequency genome-coverage
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Jan 24, 2025 - R
A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.
gene compression nanopore sam pacbio compress bam fastq genomic-data-compression compression-rate fastq-compression gtx
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Apr 18, 2022
MyGene.info: A BioThings API for gene annotations
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Sep 2, 2025 - Python
Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files
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Aug 30, 2021 - Jupyter Notebook
An elegant package to visualize gene structures
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Apr 8, 2023 - R
API for linked biological knowledge
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Apr 26, 2022 - Python
🧬 Gene analysis toolkit based on R
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Jan 6, 2025 - R
Generic human DNA variant annotation pipeline
docker workflow gene singularity vcf variants snv vep disease-gene-association indels annotation-tool vcfanno germline variant-annotations annotation-framework snvs
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Feb 13, 2024 - Python
A minimal desktop app for easy and convenient gene annotation and lookup.
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Dec 7, 2022 - JavaScript
Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
tfs roadmap gene rna-seq motif gene-expression regulation epigenetics encode cell chip-seq hotspot plasticity transcription-factor-binding motifs epigenomics fimo haystack-bio specific-regions haystack-pipeline
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Jun 21, 2022 - HTML
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
count gene r human rstats bioconductor rnaseq deseq2 illumina exon junction derfinder annotation-agnostic recount
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Dec 12, 2024 - R
Annotate DNA sequences for Gene Ontology terms
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Sep 11, 2025 - Perl
A standalone interactive application for detecting biological significance on a set of genes
gene shiny data-visualization gene-ontology shiny-apps kegg-pathway enrichment-analysis non-model-species gene-list sig-bio-shiny annotationhub
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May 2, 2021 - R
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