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[MAINT] Update publications spreadsheet #93

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2 changes: 2 additions & 0 deletions _data/publications/publications.csv
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pmid,pmcid,doi,title,authors,year,month,day,journal,volume,issue,pages
41280080,PMC12632981,10.1101/2025.10.15.682705,Hippocampal grey matter changes across scales in Alzheimer's Disease,"['Karat BG', 'Farahani MV', 'Davidson M', 'Thurairajah A', 'Taha A', 'Schmitz TW', 'Khan AR']",2025,10,15,bioRxiv,,,
41034610,PMC12510884,10.1038/s41592-025-02783-3,HippoMaps: multiscale cartography of human hippocampal organization,"['DeKraker J', 'Cabalo DG', 'Royer J', 'Ngo A', 'Khan AR', 'Karat BG', 'Benkarim O', 'Rodriguez-Cruces R', 'Frauscher B', 'Pana R', 'Hansen JY', 'Misic B', 'Valk SL', 'Lau JC', 'Kirschner M', 'Bernasconi A', 'Bernasconi N', 'Muenzing SEA', 'Axer M', 'Amunts K', 'Evans AC', 'Bernhardt BC']",2025,10,1,Nat Methods,22,10,2211-2222
40505888,,10.1016/j.bpsc.2025.06.001,Neurite Density and Kurtosis in the Gray Matter of People With Early Schizophrenia,"['Van Dyken PC', 'Khan AR', 'Palaniyappan L']",2025,6,10,Biol Psychiatry Cogn Neurosci Neuroimaging,,,
40202728,PMC11983296,10.1001/jamapsychiatry.2025.0432,Convergence of Cannabis and Psychosis on the Dopamine System,"['Ahrens J', 'Ford SD', 'Schaefer B', 'Reese D', 'Khan AR', 'Tibbo P', 'Rabin R', 'Cassidy CM', 'Palaniyappan L']",2025,6,1,JAMA Psychiatry,82,6.0,609-617
40404790,PMC12098761,10.1038/s42003-025-08165-x,Early life stress impairs hippocampal subfield myelination,"['Nichols ES', 'Karat BG', 'Grace M', 'Bezanson S', 'Khan AR', 'Duerden EG']",2025,5,22,Commun Biol,8,1.0,785
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176 changes: 113 additions & 63 deletions get_publications.ipynb
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Expand All @@ -187,7 +187,7 @@
"text": [
"Total number of publications containing \"Khan AR\"[AUTH] AND (\"2015/01/01\"[PDAT] : \"3000/12/31\"[PDAT]) AND\n",
" (\"Western University\"[AFFL] OR \"University of Western Ontario\"[AFFL] OR\n",
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Expand All @@ -294,10 +294,18 @@
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"87 total articles found.\n",
"0 new articles found.\n",
"89 total articles found.\n",
"2 new articles found.\n",
"\n",
"New publications found:\n"
"New publications found:\n",
"Title: Hippocampal grey matter changes across scales in Alzheimer's Disease (bioRxiv)\n",
"Authors: ['Karat BG', 'Farahani MV', 'Davidson M', 'Thurairajah A', 'Taha A', 'Schmitz TW', 'Khan AR']\n",
"Journal (Date): bioRxiv (10/15/2025)\n",
"\n",
"Title: HippoMaps: multiscale cartography of human hippocampal organization (Nat Methods)\n",
"Authors: ['DeKraker J', 'Cabalo DG', 'Royer J', 'Ngo A', 'Khan AR', 'Karat BG', 'Benkarim O', 'Rodriguez-Cruces R', 'Frauscher B', 'Pana R', 'Hansen JY', 'Misic B', 'Valk SL', 'Lau JC', 'Kirschner M', 'Bernasconi A', 'Bernasconi N', 'Muenzing SEA', 'Axer M', 'Amunts K', 'Evans AC', 'Bernhardt BC']\n",
"Journal (Date): Nat Methods (10/1/2025)\n",
"\n"
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Expand All @@ -323,16 +331,16 @@
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Expand Down Expand Up @@ -374,14 +382,56 @@
" </tr>\n",
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" <td>10.1101/2025.10.15.682705</td>\n",
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"Empty DataFrame\n",
"Columns: [pmid, pmcid, doi, title, authors, year, month, day, journal, volume, issue, pages]\n",
"Index: []"
" pmid pmcid doi \\\n",
"0 41280080 PMC12632981 10.1101/2025.10.15.682705 \n",
"1 41034610 PMC12510884 10.1038/s41592-025-02783-3 \n",
"\n",
" title \\\n",
"0 Hippocampal grey matter changes across scales ... \n",
"1 HippoMaps: multiscale cartography of human hip... \n",
"\n",
" authors year month day \\\n",
"0 [Karat BG, Farahani MV, Davidson M, Thurairaja... 2025 10 15 \n",
"1 [DeKraker J, Cabalo DG, Royer J, Ngo A, Khan A... 2025 10 1 \n",
"\n",
" journal volume issue pages \n",
"0 bioRxiv \n",
"1 Nat Methods 22 10 2211-2222 "
]
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