Tas/fast spectrogram#32

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stoutta6 wants to merge 35 commits intomainfrom

tas/fast-spectrogram

Commits on Jan 13, 2026

Changed name for easier IDE debugging
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Added "fast_mode" pipeline option
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Linting
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Turned off line_profiler for speed
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Merge remote-tracking branch 'origin/main' into tas/fast-spectrogram
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Commits on Jan 14, 2026

Fast mode improvements - combine coarse candidates before filtering
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Commits on Jan 16, 2026

Don't print line_profiler in fast mode
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Added batch preprocessing to make compressed spectrograms
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Commits on Jan 27, 2026

Commits on Jan 28, 2026

Added edge case fixes. Added small buffer to bat call contour
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Fixed STFT low values getting cut off, expanded default dynamic range
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STFT outside sample rate support explicitly removed, turned back on autogain in fast mode
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Adjusted preprocessing terminal prints, now includes list of failed files. Added random seed, removed randomness from serial execution
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Added debug argument to pipeline, added failed files list output to parallel pipeline
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Handling zero-valued STFT when converting to dB
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Formatting click help
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Linting, and added printing exceptions for failed files
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Linting
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Commits on Jan 29, 2026

Remove LineProfiler init
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Renaming file for merge
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Merge branch 'main' of https://github.com/Kitware/batbot into tas/fast-spectrogram
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Renaming to allow for IDE debug
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Linting
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Removing unused import
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Linting
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Updated for new compute argument
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Linting
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Combine support for output folder and/or filename stem
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Cleanup prior to merge
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