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Tas/fast spectrogram #32
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… filename stem input to pipelines
… directory structure to mirror input structure in user specified folder
…ow ignore any high frequencies without data, optionally disable tqdm, added padding in contour finding, handling empty echo masks, optional force overwrite, output filestem specification, reduced some thresholds to handle mostly flat bat calls, added fast mode metadata, handling peak amplitude location movement in processing chain, fixed some bat call metadata values
…utogain in fast mode
…iles. Added random seed, removed randomness from serial execution
Codecov Report❌ Patch coverage is
❌ Your patch status has failed because the patch coverage (37.5%) is below the target coverage (50.0%). You can increase the patch coverage or adjust the target coverage. Additional details and impacted files@@ Coverage Diff @@
## main #32 +/- ##
========================================
- Coverage 71.3% 56.7% -14.6%
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Files 6 7 +1
Lines 969 1299 +330
========================================
+ Hits 691 737 +46
- Misses 278 562 +284
Continue to review full report in Codecov by Sentry.
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Adding "fast mode" spectrogram generation, a "preprocess" CLI function to produce batches of compressed spectrograms in parallel, and multiple tweaks and fixes to make batbot more error tolerant and handle edge cases.