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Update index linking for outreach.md page #139

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Update index linking for outreach.md page
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2 changes: 1 addition & 1 deletion docs/source/explore_analyze/index.md
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Expand Up @@ -16,7 +16,7 @@ orphan: true

[Explore custom tools](analyze_data.md#custom-tools) for annotation and data exploration.

[Find workshops](workshops.md).
[Find outreach events](outreach.md).

```{toctree}
:hidden:
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50 changes: 25 additions & 25 deletions docs/source/explore_analyze/outreach.md
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Expand Up @@ -31,11 +31,11 @@ This section highlights materials that may be useful beyond the original event t
[View capsule](https://codeocean.allenneuraldynamics.org/capsule/0692322/tree/v3)
---

# Workshops
## Workshops

Workshops provide structured training experiences focused on datasets, tools, and computational approaches used across the Allen Institute for Neural Dynamics.

## Summer Workshop on the Dynamic Brain 2025
### Summer Workshop on the Dynamic Brain 2025

**Date:** August 24 – September 7, 2025
**Audience:** graduate students, researchers
Expand All @@ -44,13 +44,13 @@ Workshops provide structured training experiences focused on datasets, tools, an

A two-week summer course focused on computational analysis of large-scale neuroscience datasets.

### Resources
#### Resources
- [Code Ocean collection](https://codeocean.allenneuraldynamics.org/collections/815cebfe-1829-4287-8e99-f1346b5d6ccb)
- [SWDB Data Book](https://allenswdb.github.io/intro.html)

---

## Workshop at Western Washington University
### Workshop at Western Washington University

**Date:** October 30, 2025

Expand All @@ -60,13 +60,13 @@ A two-week summer course focused on computational analysis of large-scale neuros

This workshop included short talks on team science, an overview of Allen Institute for Neural Dynamics, and hands-on code tutorials using neuron reconstructions from the Brain-wide Anatomy platform and neurophysiology and behavior data from the BCI project.

### Resources
#### Resources
- [Exa-SPIM tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/0685965/tree/v1)
- [BCI / Credit Assignment tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/0692322/tree/v1)

---

## Workshop at Okinawa Institute of Science and Technology
### Workshop at Okinawa Institute of Science and Technology

**Date:** January 30, 2025
**Audience:** researchers
Expand All @@ -78,11 +78,11 @@ This workshop focused on introducing and sharing resources from the Brain-wide A

---

# Hackathons
## Hackathons

Hackathons are collaborative coding events where participants work directly with Allen Institute datasets and develop exploratory analyses, tools, or prototype research workflows.

## University of Washington Neurohackathon (2026)
### University of Washington Neurohackathon (2026)

**Date:** March 6–8, 2026
**Audience:** undergraduate students, graduate students, researchers
Expand All @@ -91,12 +91,12 @@ Hackathons are collaborative coding events where participants work directly with

Our second year participating in the UW Neurohackathon, sharing updated data and tutorials from the *Credit Assignment During Learning* project.

### Resources
#### Resources
- [BCI / Credit Assignment tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/0692322/tree/v3)

---

## University of Washington Neurohackathon (2025)
### University of Washington Neurohackathon (2025)

**Date:** May 16–18, 2025
**Audience:** undergraduate students, graduate students, researchers
Expand All @@ -105,12 +105,12 @@ Our second year participating in the UW Neurohackathon, sharing updated data and

A hackathon organized by the Conect and Synaptech student clubs at UW, where participants used neurotechnology devices and/or Allen Institute neural datasets to develop a project or prototype.

### Resources
#### Resources
- [BCI / Credit Assignment tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/6784496/tree/v1)

---

## UW CNC–AIND Hackacollabathon: Credit Assignment During Learning
### UW CNC–AIND Hackacollabathon: Credit Assignment During Learning

**Date:** May 14, 2025
**Audience:** graduate students, researchers
Expand All @@ -119,12 +119,12 @@ A hackathon organized by the Conect and Synaptech student clubs at UW, where par

A collaborative hackathon to share new data from the *Credit Assignment During Learning* project with researchers at UW and the Allen Institute.

### Resources
#### Resources
- [BCI / Credit Assignment tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/6784496/tree/v1)

---

## UW CNC–AIND Hackacollabathon: Mesoscale Connectivity
### UW CNC–AIND Hackacollabathon: Mesoscale Connectivity

**Date:** December 4, 2024
**Audience:** undergraduate students, graduate students, researchers
Expand All @@ -133,16 +133,16 @@ A collaborative hackathon to share new data from the *Credit Assignment During L

A collaborative hackathon to share new data from the *Thalamus in the Middle* project with researchers at UW and the Allen Institute.

### Resources
#### Resources
- [Mesoscale Connectivity tutorial capsule](https://codeocean.allenneuraldynamics.org/capsule/6784496/tree/v1)

---

# Conference Sessions & Talks
## Conference Sessions & Talks

Conference sessions and invited talks help introduce Allen Institute datasets, tools, and scientific resources to broader technical and research communities.

## Talk at Cosyne Tutorial Session
### Talk at Cosyne Tutorial Session

**Date:** March 12, 2026
**Audience:** researchers
Expand All @@ -153,7 +153,7 @@ A talk delivered during the Cosyne tutorial session highlighting datasets, tools

---

## Talk at the NeurIPS Data on the Brain & Mind Workshop
### Talk at the NeurIPS Data on the Brain & Mind Workshop

**Date:** December 7, 2025
**Audience:** researchers (machine learning, AI, neuroscience)
Expand All @@ -162,17 +162,17 @@ A talk delivered during the Cosyne tutorial session highlighting datasets, tools

A short talk during a workshop on AI applications for neuroscience and cognitive science data, highlighting a preprint and code tutorial from the Visual Behavior Neuropixels project.

### Resources
#### Resources
- [Workshop website](https://data-brain-mind.github.io/)
- [Blogpost on the tutorial](https://data-brain-mind.github.io/tutorials/an-overview-of-the-neuropixels-visual-behavior-dataset-from-the-allen-institute/)

---

# Lectures & Classroom Outreach
### Lectures & Classroom Outreach

Lectures and classroom activities support student learning by introducing Allen Institute datasets and computational neuroscience workflows in educational settings.

## Lecture at Undergraduate Course at University of Puget Sound
### Lecture at Undergraduate Course at University of Puget Sound

**Date:** September 24, 2025
**Audience:** undergraduate students (neuroscience, computer science)
Expand All @@ -181,12 +181,12 @@ Lectures and classroom activities support student learning by introducing Allen

A lecture for an undergraduate class in which students developed quarter-long research projects using Allen Institute datasets.

### Resources
#### Resources
- [Code tutorial repository](https://github.com/AllenNeuralDynamics/ups_nrsc490_tutorial/tree/main)

---

## Code Tutorial for High School Field Trip
### Code Tutorial for High School Field Trip

**Date:** February 13, 2026
**Audience:** high school students
Expand All @@ -195,11 +195,11 @@ A lecture for an undergraduate class in which students developed quarter-long re

A code tutorial for high school group visiting the Allen Institute, focused on introducing neural anatomy data and mapping connections between brain areas.

### Resources
#### Resources
- [Code tutorial repository](https://github.com/leesuyee/mesoscale-connectivity-tutorial)

---

## Have questions? Interested in using our materials?
### Have questions? Interested in using our materials?

Contact the Data & Outreach team.
3 changes: 2 additions & 1 deletion docs/source/index.md
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Expand Up @@ -53,7 +53,8 @@ acquire_upload/process_data
explore_analyze/quality_control
explore_analyze/find_data
explore_analyze/analyze_data
explore_analyze/workshops
explore_analyze/outreach


```

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