Skip to content

datasets.md

Latest commit

 

History

History
64 lines (43 loc) · 1.35 KB

datasets.md

File metadata and controls

64 lines (43 loc) · 1.35 KB

Datasets

Put all files under data/. This folder is not uploaded to GitHub.

C3VD (start here)

Download one small sequence from durrlab.github.io/C3VD.

Zip Frames Size
trans_t1_a 61 ~0.6 GB
trans_t2_b 103 ~1 GB
desc_t4_a 148 ~1.2 GB

After unzip:

data/c3vd/trans_t1_a/
  0000_color.png
  pose.txt
  ...

Run:

python scripts/run_coverage.py --config configs/c3vd.yaml

EndoSLAM

Download from Mendeley. The GitHub repo is code only, not the images.

data/endoslam/UnityCam/Colon/Frames/Frames/*.png
data/endoslam/Cameras/MiroCam/.../Frames/*.png

Configs:

  • configs/endoslam_mirocam_traj1.yaml
  • configs/endoslam_unity_colon.yaml

Check folders: python scripts/inspect_endoslam.py

EndoMapper (optional)

Needs Synapse access: https://www.synapse.org/Synapse:syn26707219
Not required if you have C3VD and EndoSLAM.

SurgT (optional)

https://github.com/Cartucho/SurgT_benchmarking
Skip if download links fail.

Links

Name URL
C3VD https://durrlab.github.io/C3VD/
EndoSLAM https://data.mendeley.com/datasets/cd2rtzm23r/1
EndoMapper https://www.synapse.org/Synapse:syn26707219

See scripts/download_data.md.