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jeromekelleher merged 1 commit into from
Dec 3, 2025
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cite which version of Fst; closes #858 #3346

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5 changes: 5 additions & 0 deletions python/tskit/trees.py
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Expand Up @@ -10051,6 +10051,11 @@ def Fst(
What is computed for diversity and divergence depends on ``mode``;
see those functions for more details.

For ``mode='site'``, this definition of Fst appears as equation (6) in
`Slatkin (1991) <https://doi.org/10.1017/S0016672300029827>`_, and
is also found as equation (9) in
`Nei (1973) <https://doi.org/10.1073/pnas.70.12.3321>`_.

:param list sample_sets: A list of lists of Node IDs, specifying the
groups of nodes to compute the statistic with.
:param list indexes: A list of 2-tuples.
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