Updates from package template

.cruft.json

@@ -1,6 +1,6 @@
 {
   "template": "https://github.com/sunpy/package-template",
-  "commit": "4268346dead7b529a3d53df19bcf374bb2bbef34",
+  "commit": "9599f755e4f7880fe20f0f07bbf500d8c41de34d",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -23,6 +23,7 @@
       "include_example_code": "n",
       "include_cruft_update_github_workflow": "y",
       "use_extended_ruff_linting": "y",
+      "matrix_room_id": "!jfEXWJFdXwYnBWsiqk:openastronomy.org",
       "_sphinx_theme": "sunpy",
       "_parent_project": "",
       "_install_requires": "",
@@ -32,7 +33,7 @@
         ".github/workflows/sub_package_update.yml"
       ],
       "_template": "https://github.com/sunpy/package-template",
-      "_commit": "4268346dead7b529a3d53df19bcf374bb2bbef34"
+      "_commit": "9599f755e4f7880fe20f0f07bbf500d8c41de34d"
     }
   },
   "directory": null

.github/dependabot.yml

@@ -1,19 +1,18 @@
-# To get started with Dependabot version updates, you'll need to specify which
-# package ecosystems to update and where the package manifests are located.
-# Please see the documentation for all configuration options:
-# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
-
 version: 2
 updates:
-  - package-ecosystem: "github-actions" # See documentation for possible values
-    directory: "/" # Location of package manifests
+  - package-ecosystem: "github-actions"
+    directory: "/"
     schedule:
-      interval: "weekly"
-  - package-ecosystem: "Cargo"
+      interval: "monthly"
+    cooldown:
+      default-days: 7
+  - package-ecosystem: "cargo"
     directory: "/"
     schedule:
       interval: "monthly"
     groups:
       rust:  # group all rust deps into a single PR
         patterns:
           - "*"
+    cooldown:
+      default-days: 7

.github/workflows/ci.yml

@@ -27,17 +27,21 @@ concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
   cancel-in-progress: true
 
+permissions: {}
+
 jobs:
   rust:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
-      - uses: hecrj/setup-rust-action@v2
+      - uses: actions/checkout@v6  # zizmor: ignore[unpinned-uses]
+        with:
+          persist-credentials: false
+      - uses: hecrj/setup-rust-action@v2  # zizmor: ignore[unpinned-uses]
       - run: cargo test
 
   core:
     needs: [rust]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       submodules: false
       coverage: codecov
@@ -50,8 +54,10 @@ jobs:
   sdist_verify:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
-      - uses: actions/setup-python@v6
+      - uses: actions/checkout@v6  # zizmor: ignore[unpinned-uses]
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v6  # zizmor: ignore[unpinned-uses]
         with:
           python-version: '3.13'
       - run: python -m pip install -U --user build
@@ -60,8 +66,8 @@ jobs:
       - run: python -m twine check dist/*
 
   test:
-    needs: [core, sdist_verify, rust]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    needs: [core, sdist_verify]
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       submodules: false
       coverage: codecov
@@ -79,7 +85,7 @@ jobs:
 
   docs:
     needs: [core]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       default_python: '3.13'
       submodules: false
@@ -91,7 +97,7 @@ jobs:
       envs: |
         - linux: build_docs
 
-  publish:
+  build_dists:
     # Build wheels on PRs only when labelled. Releases will only be published if tagged ^v.*
     # see https://github-actions-workflows.openastronomy.org/en/latest/publish.html#upload-to-pypi
     if: |
@@ -101,12 +107,11 @@ jobs:
         contains(github.event.pull_request.labels.*.name, 'Run publish')
       )
     needs: [test, docs]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/publish.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/publish.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       sdist: true
       test_extras: 'tests'
       test_command: 'pytest -p no:warnings --doctest-rst --pyargs streamtracer'
-      submodules: false
       targets: |
         - cp3{12,13,14}-manylinux_x86_64
         - cp3{12,13,14}-musllinux_x86_64
@@ -115,20 +120,45 @@ jobs:
         - cp3{12,13,14}-win_amd64
         - target: cp3{12,13,14}-manylinux_aarch64
           runs-on: ubuntu-24.04-arm
-    secrets:
-      pypi_token: ${{ secrets.pypi_token }}
+      submodules: false
+      save_artifacts: true
+      upload_to_pypi: false
+
+  publish:
+    if: startsWith(github.ref, 'refs/tags/v')
+    name: Upload to PyPI
+    runs-on: ubuntu-latest
+    needs: [build_dists]
+    permissions:
+      id-token: write
+    environment:
+      name: pypi
+    steps:
+      - name: Download artifacts
+        uses: actions/download-artifact@v8  # zizmor: ignore[unpinned-uses]
+        with:
+          merge-multiple: true
+          pattern: dist-*
+          path: dist
+
+      - run: ls -lha dist/
+
+      - name: Run upload
+        uses: pypa/gh-action-pypi-publish@v1.13.0  # zizmor: ignore[unpinned-uses]
 
   notify:
-    if: always() && (github.event_name == 'schedule' || github.event_name == 'workflow_dispatch')
-    needs: [publish]
+    if: ${{ !cancelled() && (github.event_name == 'workflow_dispatch' || github.event_name == 'schedule') }}
+    needs: [build_dists]
     runs-on: ubuntu-latest
+    environment:
+      name: matrix
     steps:
-      - uses: Cadair/matrix-notify-action@main
+      - uses: Cadair/matrix-notify-action@main  # zizmor: ignore[unpinned-uses]
         with:
-          matrix_token: ${{ secrets.matrix_access_token }}
+          workflow_description: "CI Workflow in sunpy/streamtracer"
+          matrix_token: ${{ secrets.MATRIX_ACCESS_TOKEN }}
           github_token: ${{ secrets.GITHUB_TOKEN }}
-          homeserver: ${{ secrets.matrix_homeserver }}
+          homeserver: ${{ secrets.MATRIX_HOMESERVER }}
           roomid: '!jfEXWJFdXwYnBWsiqk:openastronomy.org'
-          ignore_pattern: '.*Load.*'
+          ignore_pattern: '.*(Load|report overall).*'
           summarise_success: true
-          workflow_description: 'in sunpy/streamtracer'

.github/workflows/pre-commit.yml

@@ -7,14 +7,16 @@ concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
   cancel-in-progress: true
 
+permissions: {}
+
 jobs:
   run:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v6
-    - uses: actions/setup-python@v6
+    - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
+      with:
+        persist-credentials: false
+    - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: 3.x
-    - uses: pre-commit/action@v3.0.1
-    - uses: pre-commit-ci/lite-action@v1.1.0
-      if: always()
+    - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1

.github/workflows/sub_package_update.yml

@@ -13,18 +13,20 @@ on:
     #        │ │ │ │ ┌───────── day of the week (0 - 6 or SUN-SAT)
     - cron: '0 7 * * 1'  # Every Monday at 7am UTC
 
+permissions: {}
+
 jobs:
   update:
     runs-on: ubuntu-latest
     permissions:
       contents: write
       pull-requests: write
-    strategy:
-      fail-fast: true
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v6  # zizmor: ignore[unpinned-uses]
+        with:
+          persist-credentials: false
 
-      - uses: actions/setup-python@v6
+      - uses: actions/setup-python@v6  # zizmor: ignore[unpinned-uses]
         with:
           python-version: "3.14"
 
@@ -50,8 +52,8 @@ jobs:
         id: cruft_update
         if: steps.check.outputs.has_changes == '1'
         run: |
-          git config --global user.email "${{ github.actor }}@users.noreply.github.com"
-          git config --global user.name "${{ github.actor }}"
+          git config --global user.email "${GITHUB_ACTOR}@users.noreply.github.com"
+          git config --global user.name "${GITHUB_ACTOR}"
 
           cruft_output=$(cruft update --skip-apply-ask --refresh-private-variables)
           echo $cruft_output
@@ -77,7 +79,7 @@ jobs:
 
       - name: Create pull request
         if: steps.cruft_json.outputs.has_changes == '1'
-        uses: peter-evans/create-pull-request@v8
+        uses: peter-evans/create-pull-request@v8  # zizmor: ignore[unpinned-uses]
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
           add-paths: "."
@@ -102,7 +104,7 @@ jobs:
       issues: write
     steps:
       - name: Open an issue if workflow fails
-        uses: actions/github-script@v7
+        uses: actions/github-script@v8  # zizmor: ignore[unpinned-uses]
         with:
           github-token: ${{ github.token }}
           # This script is adapted from https://github.com/scientific-python/issue-from-pytest-log-action
@@ -150,7 +152,7 @@ jobs:
                 repo: variables.name,
                 body: issue_body,
                 title: variables.title,
-                labels: [variables.label],
+                labels: [variables.label, "pre-commit.ci autofix"],
               });
             } else {
               await github.rest.issues.update({

.pre-commit-config.yaml

@@ -1,54 +1,82 @@
 repos:
+  - repo: https://github.com/zizmorcore/zizmor-pre-commit
+    rev: v1.23.1
+    hooks:
+      - id: zizmor
     # This should be before any formatting hooks like isort
   - repo: https://github.com/astral-sh/ruff-pre-commit
     rev: "v0.15.4"
     hooks:
       - id: ruff
         args: ["--fix"]
+        types: [python]
+        # Define here once and then reference using YAML anchor
+        exclude: &exclude_dirs ^streamtracer/(data|extern)/
   - repo: https://github.com/PyCQA/isort
     rev: 8.0.1
     hooks:
       - id: isort
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*|extern.*|streamtracer/extern)$"
+        types: [python]
+        exclude: *exclude_dirs
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v6.0.0
     hooks:
       - id: check-ast
+        types: [python]
+        exclude: *exclude_dirs
       - id: check-case-conflict
+        types: [python]
+        exclude: *exclude_dirs
       - id: trailing-whitespace
-        exclude: ".*(.fits|.fts|.fit|.header|.txt)$"
+        types_or: [python, rst, rust]
       - id: check-yaml
+        types: [yaml]
+        exclude: *exclude_dirs
+      - id: check-toml
+        types: [toml]
+        exclude: *exclude_dirs
       - id: debug-statements
+        types: [python, rust]
+        exclude: *exclude_dirs
       - id: check-added-large-files
         args: ["--enforce-all", "--maxkb=1054"]
       - id: end-of-file-fixer
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*|.json)$|^CITATION.rst$"
+        types_or: [python, rst, rust]
       - id: mixed-line-ending
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*)$"
+        types_or: [python, rst, rust]
   - repo: https://github.com/codespell-project/codespell
     rev: v2.4.1
     hooks:
       - id: codespell
         args: [ "--write-changes" ]
+        types_or: [python, rst, rust]
+        exclude: *exclude_dirs
   # Run mypy type validation
   -   repo: https://github.com/pre-commit/mirrors-mypy
       rev: 'v1.10.0'
       hooks:
       - id: mypy
+        types: [python]
+        exclude: *exclude_dirs
         additional_dependencies: [types-setuptools]
   # Python code formatting
   - repo: https://github.com/psf/black
     rev: 24.4.2
     hooks:
       - id: black
+        types: [python]
+        exclude: *exclude_dirs
   # Rust code formatting
   - repo: https://github.com/FeryET/pre-commit-rust
     rev: v1.1.0
     hooks:
       - id: cargo-check
+        types: [rust]
       - id: clippy
         args: ["--allow-staged", "--fix", "--", "-A", "clippy::needless_return", "-W", "clippy::implicit_return"]
+        types: [rust]
       - id: fmt
+        types: [rust]
 ci:
   autofix_prs: false
   autoupdate_schedule: "quarterly"