Skip to content

Update Singularity.v3.9-torch1.13.1-dj0.13.1.def #14

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
kklurz wants to merge 4 commits into
base: main
Choose a base branch
from
Open

Update Singularity.v3.9-torch1.13.1-dj0.13.1.def #14

Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
bd073ed
Update Singularity.v3.9-torch1.13.1-dj0.13.1.def
kklurz Apr 27, 2023
c5db047
Merge pull request #15 from sinzlab/main
kklurz Apr 27, 2023
0ad635e
change ubuntu version
kklurz Apr 27, 2023
6eb0adb
test same file as was already working from MAx
kklurz Apr 27, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
17 changes: 8 additions & 9 deletions Singularity.v3.9-torch1.13.1-dj0.13.1.def
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,13 +1,11 @@
BootStrap: docker
From: ubuntu:22.04
From: ubuntu:21.10

%labels
MAINTAINER Christoph Blessing <chris24.blessing@gmail.com>

%post
apt update
DEBIAN_FRONTEND=noninteractive TZ=Etc/UTC apt install -y tzdata
apt install -y software-properties-common
apt update && apt install -y software-properties-common
add-apt-repository universe


Expand Down Expand Up @@ -47,7 +45,7 @@ MAINTAINER Christoph Blessing <chris24.blessing@gmail.com>
blackcellmagic\
pytest \
pytest-cov \
numpy==1.23.5 \
numpy \
matplotlib \
scipy \
pandas \
Expand All @@ -61,12 +59,13 @@ MAINTAINER Christoph Blessing <chris24.blessing@gmail.com>
gitpython \
Pillow==8.0.1 \
jupyterlab \
datajoint==0.13.1
datajoint==0.12.7

python3.9 -m pip --no-cache-dir install \
torch==1.13.1 \
torchvision==0.14.1 \
torchaudio==0.13.1 \
torch==1.11.0+cu113 \
torchvision==0.12.0+cu113 \
torchaudio==0.11.0+cu113 \
-f https://download.pytorch.org/whl/cu113/torch_stable.html

%environment
export SHELL=/bin/sh
Expand Down