This repository was archived by the owner on Jul 29, 2025. It is now read-only.
Draft
Conversation
Currently, it loads the first example file, downloads OTT IDs, downloads the induced subtree, and starts reasoning over the resolution.
c089b8d to
a381ba9
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to subscribe to this conversation on GitHub.
Already have an account?
Sign in.
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This PR adds support for retrieving a list of all the species within a clade according to the Open Tree of Life, and querying their GBIF IDs using the GBIF API.
WIP: UI needs polishing. Also, we currently strictly retrieve species, while Open Tree sometimes doesn't label the species but does label the subspecies. So we should modify this to retrieve the subspecies information as well.
Should be merged after #30.