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allow valence and nagl parameters#733

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mattwthompson merged 20 commits intomainfrom
fix-system-subset
Mar 3, 2026
Merged

allow valence and nagl parameters#733
mattwthompson merged 20 commits intomainfrom
fix-system-subset

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@lilyminium
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Description

Fixes #727 by adding vdW forces to the system_subset and a bunch of tests.

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codecov Bot commented Feb 12, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 89.25%. Comparing base (653134b) to head (1c69113).
⚠️ Report is 1 commits behind head on main.

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@lilyminium lilyminium marked this pull request as ready for review February 12, 2026 21:13
@mattwthompson
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I'd like to briefly table this while we sort out openforcefield/openff-interchange#1431, but probably keep these tests in either way

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@mattwthompson mattwthompson left a comment

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Approved pending two blocking comments; I'm not asking to re-review but can if you think that would be valuable.

Please also

  • update docstring/comments to the new implementation; IIUC since vdW handlers no longer need to be added when vdW parameters aren't being fit, they shouldn't be added or present in system subsets.
  • add a one-liner in the release notes, doesn't need to be well-formatted

Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py Outdated
lilyminium and others added 5 commits March 2, 2026 17:03
Co-authored-by: Matt Thompson <matt.thompson@openforcefield.org>
Co-authored-by: Matt Thompson <matt.thompson@openforcefield.org>
Co-authored-by: Matt Thompson <matt.thompson@openforcefield.org>
Co-authored-by: Matt Thompson <matt.thompson@openforcefield.org>
@mattwthompson
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I'm not really sure why these tests are failing - grabbing locally to check

Comment thread openff/evaluator/_tests/test_utils/test_openmm.py
Comment thread openff/evaluator/_tests/test_utils/test_openmm.py
@mattwthompson mattwthompson merged commit 9f25eb3 into main Mar 3, 2026
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Can't re-fit valence parameters in Evaluator, or vsites + NAGL

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