Update the EQ in abnormalLevelOfChemicalEntity

[rays22]

This commit intends to restrict the scope of the abnormalLevelOfChemicalEntity pattern to apply to chemical qualities only in anatomical entities. To achieve this, the logical definition will be updated.

If applied, this commit will fix #981.

[sbello]

These changes make this identical to http://purl.obolibrary.org/obo/upheno/patterns/abnormalLevelOfChemicalEntityInLocation.yaml

[matentzn]

These changes make this identical to http://purl.obolibrary.org/obo/upheno/patterns/abnormalLevelOfChemicalEntityInLocation.yaml

No, not identical - there is no filler class in this pattern! Only the chemical entity and the fact that it is measured in some part of an organism (anatomical entity)

[sbello]

Ah, okay. This needs to be made very clear, maybe add a note to the top.
I still have the question of what this means for phenotypes related to levels in exhaled gases. But I think we could probably just leave these without eqs.

[matentzn]

Everything is correct about this PR but I am scared that if I merge it, I lose a lot of cross species mappings..

• This this pattern with a uPheno build