Popular repositories Loading

1. sarge sarge Public

   Heuristic, parsimony-based ancestral recombination graph inference

   C++ 17 3

2. ad-libs ad-libs Public

   local ancestry inference tool for low-coverage resequencing data

   Python 9 1

3. cellbouncer cellbouncer Public

   Tools for pooled single cell sequencing experiments: demultiplex cells, infer doublet rate, assign treatments/sgRNAs, infer ambient RNA from allele matching

   C++ 8 3

4. litterbox litterbox Public

   Clean up CAT (Comparative Annotation Toolkit) annotations

   Python 2

5. svgenes svgenes Public

   Make synteny maps and find structural variation between two genomes, by comparing genomic positions of genes, given two annotations

   Python 1

6. bio_misc bio_misc Public

   Miscellaneous bioinformatics-related stuff

   C++