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136 changes: 107 additions & 29 deletions examples/example_asr.ipynb

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115 changes: 92 additions & 23 deletions examples/example_dering.ipynb

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298 changes: 236 additions & 62 deletions examples/example_detrend.ipynb

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163 changes: 130 additions & 33 deletions examples/example_dss.ipynb

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275 changes: 222 additions & 53 deletions examples/example_dss_line.ipynb

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351 changes: 267 additions & 84 deletions examples/example_echt.ipynb

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389 changes: 315 additions & 74 deletions examples/example_mcca.ipynb

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163 changes: 130 additions & 33 deletions examples/example_mcca_2.ipynb

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494 changes: 391 additions & 103 deletions examples/example_phase_estimation.ipynb

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169 changes: 133 additions & 36 deletions examples/example_ress.ipynb

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163 changes: 130 additions & 33 deletions examples/example_star.ipynb

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225 changes: 180 additions & 45 deletions examples/example_star_dss.ipynb

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250 changes: 202 additions & 48 deletions examples/example_trca.ipynb

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10 changes: 10 additions & 0 deletions examples/run_all_notebooks.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
"""Execute all notebooks in the `./examples directory."""
from pathlib import Path

import papermill as pm

for nb in Path("./examples").glob("*.ipynb"):
pm.execute_notebook(
input_path=nb,
output_path=nb # Path to save executed notebook
)
8 changes: 4 additions & 4 deletions meegkit/__init__.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
"""M/EEG denoising utilities in python."""
__version__ = "0.1.7"
__version__ = "0.1.8"

from . import asr, cca, detrend, dss, lof, ress, sns, star, trca, tspca, utils
from . import asr, cca, detrend, dss, lof, phase, ress, sns, star, trca, tspca, utils

__all__ = ["asr", "cca", "detrend", "dss", "lof", "ress", "sns", "star", "trca",
"tspca", "utils"]
__all__ = ["asr", "cca", "detrend", "dss", "lof", "phase", "ress", "sns", "star",
"trca", "tspca", "utils"]
2 changes: 1 addition & 1 deletion meegkit/phase.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@
from scipy.fftpack import fft, fftshift, ifft, ifftshift, next_fast_len
from scipy.signal import butter, freqz

from meegkit.utils.buffer import Buffer
from .utils.buffer import Buffer


class Device:
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3 changes: 1 addition & 2 deletions pyproject.toml
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Expand Up @@ -69,8 +69,7 @@ write-changes = false
[tool.ruff]
lint.select = ["D", "E", "F", "B", "Q", "NPY", "I", "ICN", "UP"]
line-length = 90
target-version = "py310"
lint.ignore-init-module-imports = true
target-version = "py312"
lint.ignore = ["E731", "B006", "B028", "UP038", "D100", "D105", "D212"]

[tool.ruff.lint.per-file-ignores]
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