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To: {% if send_email_to_user %}{{ customerEmail }}; {{ defaultUser }}{% else %}{{ defaultUser }}{% endif %}
Subject: COSMX slide export and QC Available for {{ projectName }}
From: {{ defaultUser }}
MIME-Version: 1.0
Content-Type: text/plain

Dear {{ customerName }}, {% if not send_email_to_user %}EMAIL FOR {{ customerEmail }}{% endif %}

We would like to inform you that our wet‑lab team has completed the export of the COSMX slides for your project "{{ projectName }}". The data files and corresponding quality control (QC) reports are now available for your review.

Next steps
- Please transfer and back up the exported datasets to your HPC RDS storage.
- Review the QC reports and confirm that everything is in order.

Important notes
- COSMX slides can be exported only once.
- The exported files will remain available on Globus for 30 days and will then be removed.
- For future or repeated exports, you will need to either:
- run exports and QC checks independently, or
- request an AtoMx standalone account for long‑term access and data management.

Our AtoMx account may require cleanup of older slides in the future to make space for new projects.

Accessing your data
Data access via Globus (FILES AVAILABLE FOR 30 DAYS):

Have you already requested for a Globus collection for your project before?
- If YES, please check the existing collection for new data files.
- If NO, please let us know if we can share this data with you via Globus.
{% if hpcUser %}We need your approval before we can share this data with Globus username {{ customerUsername }}@ic.ac.uk.{% else %}Please send us your Globus username / Imperial College's username for this share.{% endif %}

Helpful guide from Imperial RCS team:
- https://icl-rcs-user-guide.readthedocs.io/en/latest/rds/transferringdata/globus/

Please contact us within 7 days if you encounter any QC issues or have questions about the data.

Subscribe to IGF mailing list for updates and announcements:
https://mailman.ic.ac.uk/mailman/listinfo/igf-users

Kind regards
Imperial BRC Genomics Facility

Imperial College London
Burlington Danes Building
Hammersmith Hospital Campus
Du Cane Road
London, W12 0NN
United Kingdom
phone +44 (0)20 7594 6521
Twitter https://twitter.com/ImperialGF
www.imperial.ac.uk/genomicsfacility