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Fix portal data sync issue #160

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Merged
avikdatta merged 1 commit into from
Feb 19, 2026
Merged

Fix portal data sync issue #160

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12 changes: 6 additions & 6 deletions igf_data/process/seqrun_processing/unified_metadata_registration.py
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Original file line number Diff line number Diff line change
Expand Up @@ -94,9 +94,9 @@ def execute(self, metadata_context: MetadataContext) -> None:
try:
portal_config_file = metadata_context.portal_config_file
fetch_metadata_url_suffix = metadata_context.fetch_metadata_url_suffix
fetch_url = urljoin(
fetch_metadata_url_suffix,
str(metadata_context.raw_cosmx_metadata_id)
fetch_url = (
f"{fetch_metadata_url_suffix}/{str(metadata_context.raw_cosmx_metadata_id)}"
.replace("//", "/")
)
new_project_data_dict = get_data_from_portal(
url_suffix=fetch_url,
Expand Down Expand Up @@ -693,9 +693,9 @@ def execute(self, metadata_context: MetadataContext) -> None:
"portal as its not registered"
)
cosmx_raw_metadata = fetched_metadata_dict.get(metadata_id)
metadata_url = urljoin(
sync_metadata_url_suffix,
str(cosmx_raw_metadata)
metadata_url = (
f"{sync_metadata_url_suffix}/{str(cosmx_raw_metadata)}"
.replace("//", "/")
)
_ = get_data_from_portal(
url_suffix=metadata_url,
Expand Down