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Hotfix aug25 COSMX fov annotation#124

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avikdatta merged 8 commits into
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hotfix_aug25_fov_annotation
Sep 8, 2025
Merged

Hotfix aug25 COSMX fov annotation#124
avikdatta merged 8 commits into
masterfrom
hotfix_aug25_fov_annotation

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Decription

This PR contains miscellaneous fixes for COSMX data processing pipelines.

List of fixes

  • Added support for old AtoMx export format
  • Added fix for white space in CosMx slide name
  • Extended panel char limit in cosmx_slide table
  • Fixed issues with existing COSMX slide metadata update in DB

Tests

  • Unit tests are passing locally

@avikdatta avikdatta merged commit 1280658 into master Sep 8, 2025
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