Update Python 3.13 support and bump dependencies#192
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mishushakov merged 18 commits intomainfrom Mar 12, 2026
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Update template to Python 3.13 base image and bump key packages for compatibility: - numpy 1.26.4 → 2.3.5 (Python 3.13 requires numpy 2.x) - scipy 1.13.1 → 1.17.0, gensim 4.3.3 → 4.4.0, numba 0.61.2 → 0.63.1, spacy 3.8.2 → 3.8.11 - e2b_charts: relax numpy constraint from ^1.26.4 to >=1.26.4 for numpy 2 compatibility Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
The published e2b_charts 0.0.4 on PyPI still has numpy<2.0.0. Until a new version is published, install it separately with --no-deps. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Keep these files as-is on main; e2b_charts updates will be in a separate PR. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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This PR depends on #193 |
jakubno
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Feb 9, 2026
jakubno
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Feb 18, 2026
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Summary
Testing
Build verified with:
python template/build_docker.py | docker build ./template -f -🤖 Generated with Claude Code
Note
Medium Risk
Upgrades the runtime to Python 3.13 and bumps core scientific dependencies (notably
numpy/scipy), which can introduce binary/ABI and transitive compatibility issues in the template image.Overview
Updates the code interpreter template to build from
python:3.13and records a minor release via changeset.Bumps key Python dependencies in
requirements.txtto versions compatible with Python 3.13, including moving tonumpy2.x (2.3.5),scipy1.17.0,gensim4.4.0, andnumba0.63.1.Simplifies the R kernel setup in
template.pyby removing the explicit CRAN apt-repo/GPG key bootstrap and relying on installingr-basedirectly before installingIRkernel.Written by Cursor Bugbot for commit 5bf02a6. This will update automatically on new commits. Configure here.