refactor: New cli for labpdfproc

[cadenmyers13]

closes #204

please see this closed PR for information on whats changed in this PR: #207. This PR was duplicated because of merge conflicts

[cadenmyers13]

@sbillinge ready for review/merge. I created a new PR to clean the commit history and I also was struggling with the merge conflict for some reason.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 99.37%. Comparing base (f1e9b63) to head (f1d3930).
⚠️ Report is 8 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #208      +/-   ##
==========================================
+ Coverage   99.31%   99.37%   +0.06%     
==========================================
  Files           5        5              
  Lines         292      322      +30     
==========================================
+ Hits          290      320      +30     
  Misses          2        2              

Files with missing lines	Coverage Δ
tests/test_tools.py	99.01% <100.00%> (+0.17%)	⬆️

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[cadenmyers13]

@sbillinge can we get this merged?