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Merged
ialarmedalien merged 1 commit into from
Sep 15, 2025
Merged

Update artifacts #71

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2 changes: 1 addition & 1 deletion src/schema/datamodel/bertron_schema_pydantic.py
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Original file line number Diff line number Diff line change
Expand Up @@ -256,7 +256,7 @@ class Entity(ConfiguredBaseModel):
'tree_root': True})

ber_data_source: BERSourceType = Field(default=..., description="""The BER member from whence the entity originated.""", json_schema_extra = { "linkml_meta": {'alias': 'ber_data_source', 'domain_of': ['Entity']} })
coordinates: Coordinates = Field(default=..., description="""The geographic coordinates associated with an entity. For entities with a bounding box, the centroid is used as the geographic reference.""", json_schema_extra = { "linkml_meta": {'alias': 'coordinates', 'domain_of': ['Entity']} })
coordinates: Optional[Coordinates] = Field(default=None, description="""The geographic coordinates associated with an entity. For entities with a bounding box, the centroid is used as the geographic reference.""", json_schema_extra = { "linkml_meta": {'alias': 'coordinates', 'domain_of': ['Entity']} })
entity_type: list[EntityType] = Field(default=..., description="""What kind of entity is this -- e.g. sequence data; a soil core; a well; field site; sample; etc.""", json_schema_extra = { "linkml_meta": {'alias': 'entity_type', 'domain_of': ['Entity']} })
description: Optional[str] = Field(default=None, description="""Textual description of the entity.""", json_schema_extra = { "linkml_meta": {'alias': 'description',
'domain_of': ['Entity', 'DataCollection'],
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20 changes: 16 additions & 4 deletions src/schema/jsonschema/bertron_schema.json
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Original file line number Diff line number Diff line change
Expand Up @@ -151,7 +151,14 @@
"description": "The BER member from whence the entity originated."
},
"coordinates": {
"$ref": "#/$defs/Coordinates",
"anyOf": [
{
"$ref": "#/$defs/Coordinates"
},
{
"type": "null"
}
],
"description": "The geographic coordinates associated with an entity. For entities with a bounding box, the centroid is used as the geographic reference."
},
"description": {
Expand Down Expand Up @@ -217,7 +224,6 @@
},
"required": [
"ber_data_source",
"coordinates",
"entity_type",
"uri"
],
Expand Down Expand Up @@ -432,7 +438,14 @@
"description": "The BER member from whence the entity originated."
},
"coordinates": {
"$ref": "#/$defs/Coordinates",
"anyOf": [
{
"$ref": "#/$defs/Coordinates"
},
{
"type": "null"
}
],
"description": "The geographic coordinates associated with an entity. For entities with a bounding box, the centroid is used as the geographic reference."
},
"description": {
Expand Down Expand Up @@ -498,7 +511,6 @@
},
"required": [
"ber_data_source",
"coordinates",
"entity_type",
"uri"
],
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