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2 changes: 1 addition & 1 deletion pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -33,7 +33,7 @@ dependencies = [

[project.optional-dependencies] # Optional
dev = [
"black~=25.1",
"black~=26.1",
"pytest~=9.0",
"pytest-cov~=7.0",
]
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1 change: 0 additions & 1 deletion sample_registry/db.py
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,6 @@
StandardHostSpecies,
)


STANDARD_TAGS = {
"SampleType": "sample_type",
"SubjectID": "subject_id",
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1 change: 0 additions & 1 deletion sample_registry/register.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,6 @@
from sample_registry.registrar import SampleRegistry
from seqBackupLib.illumina import IlluminaFastq


SAMPLES_DESC = """\
Add new samples to the registry, with annotations.
"""
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1 change: 0 additions & 1 deletion tests/test_mapping.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,6 @@
import io
from sample_registry.mapping import SampleTable


NORMAL_TSV = """\
SampleID BarcodeSequence HostSpecies SubjectID
S1 GCCT Human Hu23
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1 change: 0 additions & 1 deletion tests/test_register.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,6 @@
register_host_species,
)


samples = [
{
"SampleID": "abc123",
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