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PathoGenOmics-Lab / VIPERA Public

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feat: replace Python variables with pathvars#46

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ahmig wants to merge 9 commits intomainPathoGenOmics-Lab/VIPERA:mainfrom

feat/pathvarsPathoGenOmics-Lab/VIPERA:feat/pathvarsCopy head branch name to clipboard

Conversation Commits9 (9)Checks Files changed

Open

feat: replace Python variables with pathvars#46
ahmig wants to merge 9 commits intomainfrom
feat/pathvars

Commits

Commits on May 3, 2026

replace output directory variable with pathvars
ahmig
committed
replace logs directory variable with pathvars
ahmig
committed
ci: update log packing
ahmig
committed
replace report folder variables with pathvars
ahmig
committed
update .gitignore
ahmig
committed
revert CONTEXT_FASTA to null
ahmig
committed
fix dataset pathvar in param
ahmig
committed
remove support of Snakemake v7
ahmig
committed

Commits on May 4, 2026

ci: update logs folder
ahmig
committed

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