Remove Jupyter notebook build pipeline and Binder integration#503
Merged
timosachsenberg merged 1 commit intomasterfrom Mar 25, 2026
Merged
Remove Jupyter notebook build pipeline and Binder integration#503timosachsenberg merged 1 commit intomasterfrom
timosachsenberg merged 1 commit intomasterfrom
Conversation
- Delete CI workflows: build-push-notebooks.yaml, test-notebooks.yml, test-pr.yaml - Delete notebook generation: generate_ipynb.sh, pandoc_filters/ - Delete Binder configs: environment.yml, postBuild, jupyter_notebook_config.py - Delete Binder-only files: requirements.txt (root), navbar-run-binder.html template, new-binderIntegration.gif, msmapviewerapp/ - Update conf.py: remove navbar-run-binder from navbar_end - Update Makefile: remove doc target - Update installation.rst: remove "Try online" Binder section - Update interactive_plots.rst: remove Binder references and code - Update community/index.rst: remove Binder note - Update README.md: remove notebook/binder badges and sections Co-authored-by: timosachsenberg <5803621+timosachsenberg@users.noreply.github.com> Agent-Logs-Url: https://github.com/OpenMS/pyopenms-docs/sessions/580bd58b-93c9-4f40-9fbe-721a87c6afea
Copilot created this pull request from a session on behalf of
timosachsenberg
March 25, 2026 08:36
View session
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Strip out the entire notebook generation infrastructure and Binder integration to simplify the doc build. The Sphinx HTML build is unaffected.
Deleted
build-push-notebooks.yaml,test-notebooks.yml,test-pr.yaml— the full notebook build/test/push-to-master+ipynbpipelinegenerate_ipynb.sh,docs/pandoc_filters/(5 RST→ipynb Pandoc filters)environment.yml,postBuild,jupyter_notebook_config.py, rootrequirements.txtnavbar-run-binder.htmltemplate,new-binderIntegration.gif,msmapviewerapp/(Bokeh dashboard app)Modified
conf.py: Drop"navbar-run-binder"fromnavbar_endMakefile: Removedoctarget (was thegenerate_ipynb.shentry point)installation.rst: Remove "Try online" / Binder sectioninteractive_plots.rst: Remove Binder links and Binder-specific code blockcommunity/index.rst: Remove Binder editing caveatREADME.md: Remove notebook/Binder CI badges and sections