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Fix gh actions #1096

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Merged
JuliaSprenger merged 4 commits into from
Mar 25, 2022
Merged

Fix gh actions #1096

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1831f1d
rename full-test to io-test
samuelgarcia Mar 9, 2022
85ee633
fix date for caching bug
samuelgarcia Mar 9, 2022
8e6d259
Add more numpy version and remove macos from core test.
samuelgarcia Mar 9, 2022
f168e4b
More clean on io-test
samuelgarcia Mar 9, 2022
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5 changes: 3 additions & 2 deletions .github/workflows/core-test.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -18,9 +18,10 @@ jobs:
strategy:
fail-fast: true
matrix:
os: ["ubuntu-latest", "macos-latest", "windows-latest"]
os: ["ubuntu-latest", "windows-latest"]
# "macos-latest",
python-version: ['3.7', '3.8', '3.9']
numpy-version: ['1.16.6', '1.19.5', '1.20.3', '1.21.5', '1.22.3']
numpy-version: ['1.16.6', '1.17.5', '1.18.5', '1.19.5', '1.20.3', '1.21.5', '1.22.3']
exclude:
- python-version: '3.7'
numpy-version: '1.22.3'
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17 changes: 14 additions & 3 deletions .github/workflows/full-test.yml → .github/workflows/io-test.yml
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Expand Up @@ -19,13 +19,20 @@ jobs:
matrix:
# "macos-latest", "windows-latest"
os: ["ubuntu-latest", ]
python-version: ['3.8', ]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: 3.8
python-version: ${{ matrix.python-version }}

- name: Checkout repository
uses: actions/checkout@v2

- name: Get current year-month
id: date
run: echo "::set-output name=date::$(date+'%Y-%m')"
run: echo "::set-output name=date::$(date +'%Y-%m')"

- uses: actions/cache@v2
# the cache for python package is reset:
# * every month
Expand All @@ -36,6 +43,7 @@ jobs:
key: ${{ runner.os }}-venv-${{ hashFiles('**/requirements.txt') }}-${{ hashFiles('**/requirements_testing.txt') }}-${{ steps.date.outputs.date }}
restore-keys: |
${{ runner.os }}-venv-

- name: Install dependencies
run: |
# this is for datalad and download testing datasets
Expand All @@ -50,18 +58,21 @@ jobs:
# pip install -r requirements.txt
pip install -r requirements_testing.txt
pip install -e .

- name: Get ephy_testing_data current head hash
# the key depend on the last comit repo https://gin.g-node.org/NeuralEnsemble/ephy_testing_data.git
id: vars
run: |
echo "::set-output name=HASH_EPHY_DATASET::$(git ls-remote https://gin.g-node.org/NeuralEnsemble/ephy_testing_data.git HEAD | cut -f1)"

- uses: actions/cache@v2
id: cache-datasets
with:
path: ~/ephy_testing_data
key: ${{ runner.os }}-datasets-${{ steps.vars.outputs.HASH_EPHY_DATASET }}
restore-keys: |
${{ runner.os }}-datasets

- name: Test with pytest
run: |
source ~/test_env/bin/activate
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