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Add function for generating MA plot

enhancementNew feature or requestNew feature or request

Status: Open.

#159 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Add quantile normalization

enhancementNew feature or requestNew feature or request

Status: Open.

#158 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Clean up and improve example AOI boxplots from normalization output

enhancementNew feature or requestNew feature or request

Status: Open.

#157 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Remove Q3 to negative background plot from normalization output

enhancementNew feature or requestNew feature or request

Status: Open.

#156 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Add function for plotting Q3 score versus Negative Background

enhancementNew feature or requestNew feature or request

Status: Open.

#155 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Add function for creating QC/Filtering output table with all QC flags and AOI/gene detection rates

enhancementNew feature or requestNew feature or request

Status: Open.

#154 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Print out list of AOIs in lower detection bins from filtering output plot

enhancementNew feature or requestNew feature or request

Status: Open.

#153 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Add annotation faceting for filtering AOI and gene detection plots

enhancementNew feature or requestNew feature or request

Status: Open.

#152 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Separate AOI and Probe/Gene Filtering

enhancementNew feature or requestNew feature or request

Status: Open.

#151 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Print table of QC flags for AOIs

enhancementNew feature or requestNew feature or request

Status: Open.

#150 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Separate AOI and Probe QC

Status: Open.

#149 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024

Print QC plots separately

enhancementNew feature or requestNew feature or request

Status: Open.

#148 In NIDAP-Community/DSPWorkflow;

· escauley opened on Nov 8, 2024