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@labkey-jeckels labkey-jeckels commented Dec 19, 2024

Rationale

We are removing GWT-based code, including the MS2 protocol designer and job launcher. We can use the simpler XML-based implementation from the pipeline module.

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Changes

  • Delete now-unused code, including all MS2 GWT code
  • Improve generics
  • Misc code cleanup
  • Update tests

@labkey-jeckels labkey-jeckels linked an issue Dec 19, 2024 that may be closed by this pull request
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@labkey-jeckels labkey-jeckels marked this pull request as ready for review February 10, 2025 21:56
public static String DYNAMIC_N_TERM_PEPTIDE_MOD = "refine, potential N-terminus modifications";
public static String ENZYME = "protein, cleavage site";
public static String SEQUENCE_DB = "pipeline, database";
public static String TAXONOMY = "protein, taxon";
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Unused?

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Deleted.


public class ParameterNames
{
public static String STATIC_MOD = "residue, modification mass";
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Make all of these final? Looks like the code that mutated some of these statics (?!) is gone.

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I don't think they were ever mutated, but were never declared final when they existed in the GWT code

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SearchFormCompositeFactory mutated a few of these "constants." Fortunately, you deleted the evil class.

@labkey-jeckels labkey-jeckels merged commit e45ed23 into develop Feb 14, 2025
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@labkey-jeckels labkey-jeckels deleted the fb_deleteMs2Gwt branch February 14, 2025 00:05
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[LabKey CI] Remove MS2 GWT code

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