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LabKey / DiscvrLabKeyModules Public

forked from BimberLab/DiscvrLabKeyModules

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Merge 25.3 to develop#368

Merged

bbimber merged 21 commits intodevelopLabKey/DiscvrLabKeyModules:developfrom

fb_merge_25.3_to_developLabKey/DiscvrLabKeyModules:fb_merge_25.3_to_developCopy head branch name to clipboard

Jul 11, 2025

Conversation Commits21 (21)Checks Files changed

Merged

Merge 25.3 to develop#368
bbimber merged 21 commits intodevelopfrom
fb_merge_25.3_to_develop

Commits

Commits on Jul 2, 2025

Allow subset to use dplyr
bbimber
committed
Bugfix to vireo when using donor file
bbimber
committed
Avoid dplyr loading
bbimber
committed

Commits on Jul 3, 2025

Handle missing values
bbimber
committed
Bugfix to FindClustersAndDimRedux
bbimber
committed
Bugfix to FindClustersAndDimRedux
bbimber
committed

Commits on Jul 9, 2025

Update vireo args
bbimber
committed
Update vireo args
bbimber
committed
Reduce logging
bbimber
committed
Defer sorting of cellsnp VCF
bbimber
committed
More obvious link to ManageFileRootAction
bbimber
committed
Report summary for vireo
bbimber
committed
Always re-cache lookups after clear
bbimber
committed
TSVs need tab
bbimber
committed

Commits on Jul 10, 2025

Support sawfish
bbimber
committed
Correct sawfish argument
bbimber
committed

Commits on Jul 11, 2025

Provide sawfish with BAM input
bbimber
committed
Reduce logging
bbimber
committed
Ensure BAM index exists
bbimber
committed
Bugfix to sawfish
bbimber
committed
Fix merge conflicts
bbimber
committed

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