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Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,7 @@
import org.labkey.api.data.DisplayColumnFactory;
import org.labkey.api.data.RenderContext;
import org.labkey.api.query.FieldKey;
import org.labkey.api.util.LinkBuilder;
import org.labkey.api.util.PageFlowUtil;
import org.labkey.api.view.HttpView;
import org.labkey.api.view.template.ClientDependency;
Expand Down Expand Up @@ -40,7 +41,7 @@ public DisplayColumn createRenderer(ColumnInfo colInfo)
public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
{
Integer val = ctx.get(FieldKey.fromString(getBoundColumn().getFieldKey().getParent(), "rowId"), Integer.class);
out.write(PageFlowUtil.link("Download Sequence").
out.write(LinkBuilder.labkeyLink("Download Sequence").
attributes(Map.of("data-rowid", val.toString())).
addClass("sdc-row"));

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Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@
import org.labkey.api.data.DisplayColumn;
import org.labkey.api.data.DisplayColumnFactory;
import org.labkey.api.data.RenderContext;
import org.labkey.api.util.LinkBuilder;
import org.labkey.api.util.PageFlowUtil;
import org.labkey.api.util.URLHelper;
import org.labkey.api.writer.HtmlWriter;
Expand Down Expand Up @@ -38,7 +39,7 @@ public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
for (String v : vals)
{
out.write(delim);
out.write(PageFlowUtil.link(v).href(getFormattedURL(v)).clearClasses());
out.write(LinkBuilder.simpleLink(v, getFormattedURL(v)));
delim = "; ";
}
}
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Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,7 @@
import org.labkey.api.security.User;
import org.labkey.api.util.HtmlString;
import org.labkey.api.util.HtmlStringBuilder;
import org.labkey.api.util.LinkBuilder;
import org.labkey.api.util.PageFlowUtil;
import org.labkey.api.view.ActionURL;
import org.labkey.api.view.HttpView;
Expand Down Expand Up @@ -277,20 +278,19 @@ public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
url.addParameter("query.fileSets~contains", token);

out.write(delim);
out.write(PageFlowUtil.link(token, url).clearClasses());
out.write(LinkBuilder.simpleLink(token, url));
delim = COMMA_NEWLINE;
}
}

out.write(PageFlowUtil.link("").
clearClasses().
out.write(LinkBuilder.simpleLink("").
addClass("fa fa-pencil").
addClass("lk-dr-action-icon").
addClass("sfs-row").
attributes(PageFlowUtil.map(
"data-tt", "tooltip",
"data-rowid", rowId.toString(),
"data-original-title", "add/edit"
"data-tt", "tooltip",
"data-rowid", rowId.toString(),
"data-original-title", "add/edit"
))
);

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Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,7 @@
import org.labkey.api.security.User;
import org.labkey.api.sequenceanalysis.pipeline.SequenceOutputHandler;
import org.labkey.api.util.HtmlString;
import org.labkey.api.util.LinkBuilder;
import org.labkey.api.util.PageFlowUtil;
import org.labkey.api.view.ActionURL;
import org.labkey.api.writer.HtmlWriter;
Expand Down Expand Up @@ -251,30 +252,23 @@ private TableInfo createReadsetsTable(TableInfo sourceTable, ContainerFilter cf)
newCol.setShownInInsertView(false);
newCol.setShownInUpdateView(false);
newCol.setCalculated(true);
newCol.setDisplayColumnFactory(new DisplayColumnFactory()
newCol.setDisplayColumnFactory(colInfo -> new DataColumn(colInfo)
{
@Override
public DisplayColumn createRenderer(ColumnInfo colInfo)
public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
{
return new DataColumn(colInfo)
Object o = getValue(ctx);
if (o != null)
{
@Override
public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
{
Object o = getValue(ctx);
if (o != null)
{
ActionURL url = QueryService.get().urlFor(getUser(), ctx.getContainer(), QueryAction.executeQuery, SequenceAnalysisSchema.SCHEMA_NAME, SequenceAnalysisSchema.TABLE_READ_DATA);
url.addFilter("query", FieldKey.fromString("readset"), CompareType.EQUAL, o);

out.write(PageFlowUtil.link("View File(s)", url));
}
else
{
out.write("No Files");
}
}
};
ActionURL url = QueryService.get().urlFor(getUser(), ctx.getContainer(), QueryAction.executeQuery, SequenceAnalysisSchema.SCHEMA_NAME, SequenceAnalysisSchema.TABLE_READ_DATA);
url.addFilter("query", FieldKey.fromString("readset"), CompareType.EQUAL, o);

out.write(LinkBuilder.labkeyLink("View File(s)", url));
}
else
{
out.write("No Files");
}
}
});
ret.addColumn(newCol);
Expand Down Expand Up @@ -458,7 +452,7 @@ public void renderGridCellContents(RenderContext ctx, HtmlWriter out)
ActionURL url = DetailsURL.fromString(_baseUrl + PageFlowUtil.encode(token), ctx.getContainer()).getActionURL();

out.write(delim);
out.write(PageFlowUtil.link(token, url).clearClasses());
out.write(LinkBuilder.simpleLink(token, url));
delim = HtmlString.BR;
}
}
Expand Down