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Merged
LCrossman merged 12 commits into from
Dec 10, 2025
Merged

compare across forks #36

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ce33299
updating to include gbk_to_faa_count function
LCrossman Dec 4, 2025
d0fb0c8
setting up for asv runner
LCrossman Dec 4, 2025
68fdada
fix pyo3 flag
LCrossman Dec 4, 2025
b936f47
initiating runner for benchmarks
LCrossman Dec 4, 2025
f06611e
trigger benchmark rebuild
LCrossman Dec 4, 2025
88a2879
Trigger benchmarks with new permissions
LCrossman Dec 4, 2025
1f0d931
add missing workflow file
LCrossman Dec 4, 2025
7c2c4a1
trigger point 2
LCrossman Dec 4, 2025
09de358
trigger point 3
LCrossman Dec 4, 2025
d88a884
trigger point 4
LCrossman Dec 4, 2025
99af687
trigger point 5
LCrossman Dec 9, 2025
f1c7851
Merge branch 'main' into main
LCrossman Dec 10, 2025
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2 changes: 1 addition & 1 deletion microbiorust-py/Cargo.toml
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Expand Up @@ -7,7 +7,7 @@ keywords = ["bioinformatics","micro","bio","genomics","sequence-analysis"]
description = "Microbiology friendly bioinformatics Rust functions"
categories = ["science::bioinformatics::sequence-analysis", "science::bioinformatics::genomics", "science::bioinformatics","science","data-structures"]
exclude = [".git",".gitignore"]
repository = "https://github.com/LCrossman/microBioRust"
repository = "https://github.com/microBioRust/microBioRust"

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
[lints.rust]
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6 changes: 3 additions & 3 deletions microbiorust-py/README.md
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@@ -1,11 +1,11 @@
# microbiorust-py

**Python bindings for [microBioRust](https://github.com/LCrossman/microBioRust) — a high-performance, modular bioinformatics toolkit written in Rust.**

microBioRust is the core Rust Crate

`microbiorust-py` provides fast and memory-efficient bioinformatics functionality to Python users by leveraging the power of Rust, exposed through [PyO3](https://github.com/PyO3/pyo3). This package aims to offer an alternative to libraries like Biopython, with a focus on speed, correctness, and extensibility.

---

## Features
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