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1. TomographicPhaseRetrieval TomographicPhaseRetrieval Public

   A basic pipeline for quantitative phase retrieval from brightfield stacks as described in `Nature Photonics. 2018 Mar; 12(3):165-172``

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2. TPR4Py TPR4Py Public

   TPR4Py is a tool to recover quantitative phase differences from a 3D stack of Koehler illuminated bright field images. It is based on the Matlab script from https://c4science.ch/source/TomPhaseRet/

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3. live-cell-incubator live-cell-incubator Public

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4. sofipackage sofipackage Public

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   Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.

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5. extractTraces extractTraces Public

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6. ImDecorr ImDecorr Public

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