feat(website): add new RSV-B dashboard

website/src/layouts/base/header/getPathogenMegaMenuSections.ts

@@ -1,4 +1,5 @@
 import type { MenuIconType } from '../../../components/iconCss.ts';
+import { isStaging } from '../../../config.ts';
 import { type Organism, organismConfig, paths } from '../../../types/Organism.ts';
 import { Page } from '../../../types/pages.ts';
 import {
@@ -102,6 +103,19 @@ export function getPathogenMegaMenuSections(): PathogenMegaMenuSections {
                 underlineColor: wastewaterConfig.menuListEntryDecoration,
                 externalLink: false,
             },
+            // only on staging for now, remove when enabling on prod: https://github.com/GenSpectrum/dashboards/issues/1110
+            ...(isStaging()
+                ? [
+                      {
+                          label: 'RSV-B',
+                          iconType: 'table' as MenuIconType,
+                          href: wastewaterOrganismConfigs[wastewaterOrganisms.rsvB].path,
+                          description: wastewaterOrganismConfigs[wastewaterOrganisms.rsvB].description,
+                          underlineColor: wastewaterConfig.menuListEntryDecoration,
+                          externalLink: false,
+                      },
+                  ]
+                : []),
             {
                 label: 'RSV (non-interactive)',
                 iconType: 'table',
@@ -134,6 +148,19 @@ export function getPathogenMegaMenuSections(): PathogenMegaMenuSections {
                 underlineColor: wastewaterConfig.menuListEntryDecoration,
                 externalLink: true,
             },
+            // only on staging for now, remove when enabling on prod: https://github.com/GenSpectrum/dashboards/issues/1110
+            ...(isStaging()
+                ? [
+                      {
+                          label: 'Browse RSV-B data',
+                          iconType: 'database' as MenuIconType,
+                          href: wastewaterOrganismConfigs[wastewaterOrganisms.rsvB].browseDataUrl,
+                          description: wastewaterOrganismConfigs[wastewaterOrganisms.rsvB].browseDataDescription,
+                          underlineColor: wastewaterConfig.menuListEntryDecoration,
+                          externalLink: true,
+                      },
+                  ]
+                : []),
             {
                 label: 'Browse non-interactive RSV & Influenza data',
                 iconType: 'database',

website/src/pages/swiss-wastewater/rsv-b.astro

@@ -0,0 +1,12 @@
+---
+import Wasap from '../../components/views/wasap/Wasap.astro';
+import { isStaging } from '../../config';
+import { wastewaterOrganisms } from '../../types/wastewaterConfig';
+
+// only on staging for now, remove when enabling on prod: https://github.com/GenSpectrum/dashboards/issues/1110
+if (!isStaging()) {
+    return Astro.redirect('/404');
+}
+---
+
+<Wasap wastewaterOrganism={wastewaterOrganisms.rsvB} />

website/src/types/wastewaterConfig.ts

@@ -6,6 +6,7 @@ import { VARIANT_TIME_FRAME, type WasapPageConfig } from '../components/views/wa
 export const wastewaterOrganisms = {
     covid: 'covid',
     rsvA: 'rsv-a',
+    rsvB: 'rsv-b',
 } as const;
 
 export type WastewaterOrganismName = (typeof wastewaterOrganisms)[keyof typeof wastewaterOrganisms];
@@ -116,6 +117,47 @@ export const wastewaterOrganismConfigs: Record<WastewaterOrganismName, WasapPage
             },
         },
     },
+    [wastewaterOrganisms.rsvB]: {
+        name: 'RSV-B',
+        path: `/${wastewaterPathFragment}/rsv-b`,
+        description: 'Analyze RSV-B data that was collected by the WISE project.',
+        linkTemplate: {
+            nucleotideMutation:
+                'https://genspectrum.org/rsv-b/single-variant?sampleCollectionDateRangeLower=Last+year&nucleotideMutations={{mutation}}',
+            aminoAcidMutation:
+                'https://genspectrum.org/rsv-b/single-variant?sampleCollectionDateRangeLower=Last+year&aminoAcidMutations={{mutation}}',
+        },
+        manualAnalysisModeEnabled: true,
+        variantAnalysisModeEnabled: true,
+        lapisBaseUrl: 'https://lapis.wasap.genspectrum.org/rsvb',
+        samplingDateField: 'samplingDate',
+        locationNameField: 'locationName',
+        clinicalLapis: {
+            lapisBaseUrl: 'https://lapis.pathoplexus.org/rsv-b',
+            dateField: 'sampleCollectionDateRangeLower',
+            lineageField: 'lineage',
+        },
+        browseDataUrl: 'https://db.wasap.genspectrum.org/rsvb/search',
+        browseDataDescription: 'Browse the data in the W-ASAP Loculus instance.',
+        defaultLocationName: 'Zurich',
+        clinicalSequenceCountWarningThreshold: 50,
+        filterDefaults: {
+            manual: {
+                mode: 'manual',
+                sequenceType: 'nucleotide',
+                mutations: undefined,
+            },
+            variant: {
+                mode: 'variant',
+                sequenceType: 'nucleotide',
+                variant: 'B.D.E.1*',
+                minProportion: 0.8,
+                minCount: 15,
+                minJaccard: 0.75,
+                timeFrame: VARIANT_TIME_FRAME.all,
+            },
+        },
+    },
 };
 
 export const wastewaterConfig = {