feat: add violation summary UI and adapt standalone deployment backend

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/.classpath

@@ -1,11 +1,36 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<classpath>
-	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-17">
-		<attributes>
-			<attribute name="module" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
-	<classpathentry kind="src" path="src"/>
-	<classpathentry kind="output" path="bin"/>
-</classpath>
+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-17">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
+	<classpathentry kind="src" path="src"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/org.dataflowanalysis.analysis">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry combineaccessrules="false" kind="src" path="/org.dataflowanalysis.analysis.dfd">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry combineaccessrules="false" kind="src" path="/org.dataflowanalysis.analysis.pcm">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry combineaccessrules="false" kind="src" path="/org.dataflowanalysis.converter">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry combineaccessrules="false" kind="src" path="/org.dataflowanalysis.examplemodels">
+		<attributes>
+			<attribute name="module" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="output" path="bin"/>
+</classpath>

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/META-INF/MANIFEST.MF

@@ -2,9 +2,9 @@ Manifest-Version: 1.0
 Bundle-ManifestVersion: 2
 Bundle-Name: org.dataflowanalysis.standalone
 Bundle-SymbolicName: org.dataflowanalysis.standalone;singleton:=true
-Bundle-Version: 1.0.0.qualifier
-Require-Bundle: org.dataflowanalysis.dfd.datadictionary;bundle-version="2.0.0",
- org.dataflowanalysis.dfd.dataflowdiagram;bundle-version="2.0.0",
+Bundle-Version: 3.0.0.qualifier
+Require-Bundle: org.dataflowanalysis.dfd.datadictionary,
+ org.dataflowanalysis.dfd.dataflowdiagram,
  org.eclipse.jetty.websocket.server;bundle-version="11.0.24",
  org.eclipse.jetty.servlet;bundle-version="11.0.24",
  org.eclipse.jetty.http;bundle-version="11.0.24",
@@ -19,10 +19,10 @@ Require-Bundle: org.dataflowanalysis.dfd.datadictionary;bundle-version="2.0.0",
  org.eclipse.jetty.websocket.common;bundle-version="11.0.24",
  org.eclipse.jetty.websocket.servlet;bundle-version="11.0.24",
  org.slf4j.api;bundle-version="1.7.30",
- org.dataflowanalysis.analysis;bundle-version="3.0.0",
- org.dataflowanalysis.analysis.dfd;bundle-version="3.0.0",
- org.dataflowanalysis.converter;bundle-version="3.0.0",
- org.dataflowanalysis.pcm.extension.nodecharacteristics;bundle-version="0.1.0",
+ org.dataflowanalysis.analysis,
+ org.dataflowanalysis.analysis.dfd,
+ org.dataflowanalysis.converter,
+ org.dataflowanalysis.pcm.extension.nodecharacteristics,
  org.dataflowanalysis.analysis.pcm,
  org.palladiosimulator.commons.stoex;bundle-version="5.2.1",
  de.uka.ipd.sdq.stoex.analyser;bundle-version="5.2.1",

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/pom.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>bundles-parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>org.dataflowanalysis.standalone</artifactId>
+  <packaging>eclipse-plugin</packaging>
+</project>

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/src/org/dataflowanalysis/standalone/Application.java

@@ -1,40 +1,21 @@
 package org.dataflowanalysis.standalone;
 
-import java.util.Scanner;
-
 import org.dataflowanalysis.standalone.websocket.WebSocketServerUtils;
 import org.eclipse.equinox.app.IApplication;
 import org.eclipse.equinox.app.IApplicationContext;
 
 public class Application implements IApplication {
-	@Override
-	public Object start(IApplicationContext context) throws Exception {		
-		try {			
-            Thread webSocketServer = WebSocketServerUtils.startWebSocketServer();            
-
-            Scanner scanner = new Scanner(System.in);
-            String input = "";
-
-            System.out.println("Type 'exit' to quit the program.");
-
-            // Loop until user types "exit"            
-
-            while(webSocketServer.isAlive()) {
-            	while (!input.equalsIgnoreCase("exit")) {
-                    input = scanner.nextLine();
-            	}
-            	scanner.close();
-                return IApplication.EXIT_OK;                
-            };
-            scanner.close();            
+    @Override
+    public Object start(IApplicationContext context) throws Exception {
+        try {
+            Thread webSocketServer = WebSocketServerUtils.startWebSocketServer();
+            webSocketServer.join(); // block until server thread dies
         } catch (Exception e) {
             e.printStackTrace();
-        }      
-		return IApplication.EXIT_OK;
-	}
-
-	@Override
-	public void stop() {
-
-	}
-}
+        }
+        return IApplication.EXIT_OK;
+    }
+    @Override
+    public void stop() {
+    }
+}

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/src/org/dataflowanalysis/standalone/Main.java

@@ -1,6 +1,7 @@
 package org.dataflowanalysis.standalone;
 
 import org.dataflowanalysis.standalone.websocket.WebSocketServerUtils;
+import org.dataflowanalysis.analysis.DataFlowConfidentialityAnalysis;
 
 public class Main {
 	public static void main(String[] args) {		

backend/analysisBackendServer/bundles/org.dataflowanalysis.standalone/src/org/dataflowanalysis/standalone/analysis/Converter.java

@@ -89,7 +89,7 @@ public static WebEditorDfd analyzeAnnotate(WebEditorDfd webEditorDfd) {
     		dfdConverter.setConstraints(constraints);
     	}
     	var newJson = dfdConverter.convert(dd).getModel();
-
+     	
     	for (var child : newJson.model().children()) {
     	    if (child.type().startsWith("node") && child.annotations() != null) {
     	        var oldNode = webEditorDfd.model().children().stream().filter(node -> node.id().equals(child.id())).findAny().orElseThrow();
@@ -98,8 +98,9 @@ public static WebEditorDfd analyzeAnnotate(WebEditorDfd webEditorDfd) {
     	        oldNode.annotations().removeAll(annotationsToRemove);
     	        oldNode.annotations().addAll(child.annotations());
     	    }
-    	}    	
-    	return webEditorDfd;
+    	}
+
+    	return webEditorDfd.withViolations(newJson.violations());
     }
 
     /**

backend/analysisBackendServer/bundles/pom.xml

@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>bundles-parent</artifactId>
+  <packaging>pom</packaging>
+  <modules>
+    <module>org.dataflowanalysis.standalone</module>
+  </modules>
+</project>

backend/analysisBackendServer/features/org.dataflowanalysis.standalone.feature/feature.xml

@@ -2,7 +2,7 @@
 <feature
       id="org.dataflowanalysis.standalone.feature"
       label="Standalone DFA Feature"
-      version="1.0.0.qualifier"
+      version="3.0.0.qualifier"
       plugin="org.palladiosimulator.branding">
 
    <plugin

backend/analysisBackendServer/features/org.dataflowanalysis.standalone.feature/pom.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>features-parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>org.dataflowanalysis.standalone.feature</artifactId>
+  <packaging>eclipse-feature</packaging>
+</project>

backend/analysisBackendServer/features/pom.xml

@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>features-parent</artifactId>
+  <packaging>pom</packaging>
+  <modules>
+    <module>org.dataflowanalysis.standalone.feature</module>
+  </modules>
+</project>

backend/analysisBackendServer/releng/org.dataflowanalysis.standalone.product/org.dataflowanalysis.standalone.product

@@ -0,0 +1,50 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<?pde version="3.5"?>
+<product
+    name="Standalone DFA Server"
+    uid="org.dataflowanalysis.standalone.product"
+    id="org.dataflowanalysis.standalone.product"
+    application="org.dataflowanalysis.standalone.application"
+    version="3.0.0.qualifier"
+    useFeatures="true"
+    includeLaunchers="true"
+    autoIncludeRequirements="true">
+
+   <configIni use="default">
+   </configIni>
+
+   <launcherArgs>
+      <vmArgsMac>-XstartOnFirstThread -Dorg.eclipse.swt.internal.carbon.smallFonts</vmArgsMac>
+   </launcherArgs>
+
+   <launcher name="standalone-dfa-server">
+      <linux icon=""/>
+   </launcher>
+
+   <vm>
+      <linux include="false"/>
+   </vm>
+
+   <features>
+      <feature id="org.dataflowanalysis.standalone.feature" version="3.0.0.qualifier"/>
+      <feature id="org.eclipse.platform"/>
+   </features>
+
+   <configurations>
+      <plugin id="org.eclipse.core.runtime" autoStart="true" startLevel="4"/>
+      <plugin id="org.eclipse.equinox.common" autoStart="true" startLevel="2"/>
+      <plugin id="org.eclipse.equinox.ds" autoStart="true" startLevel="2"/>
+      <plugin id="org.eclipse.equinox.event" autoStart="true" startLevel="2"/>
+      <plugin id="org.eclipse.equinox.p2.reconciler.dropins" autoStart="true" startLevel="4"/>
+      <plugin id="org.eclipse.equinox.simpleconfigurator" autoStart="true" startLevel="1"/>
+      <plugin id="org.eclipse.osgi" autoStart="true" startLevel="-1"/>
+   </configurations>
+
+   <preferencesInfo>
+      <targetfile overwrite="false"/>
+   </preferencesInfo>
+
+   <cssInfo>
+   </cssInfo>
+
+</product>

backend/analysisBackendServer/releng/org.dataflowanalysis.standalone.product/pom.xml

@@ -0,0 +1,44 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>releng-parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>org.dataflowanalysis.standalone.product</artifactId>
+  <packaging>eclipse-repository</packaging>
+
+  <build>
+    <plugins>
+      <plugin>
+        <groupId>org.eclipse.tycho</groupId>
+        <artifactId>tycho-p2-director-plugin</artifactId>
+        <version>${tycho.version}</version>
+        <executions>
+          <execution>
+            <id>materialize-products</id>
+            <goals>
+              <goal>materialize-products</goal>
+            </goals>
+          </execution>
+          <execution>
+            <id>archive-products</id>
+            <goals>
+              <goal>archive-products</goal>
+            </goals>
+          </execution>
+        </executions>
+        <configuration>
+          <products>
+            <product>
+              <id>org.dataflowanalysis.standalone.product</id>
+              <archiveFileName>standalone-dfa-server</archiveFileName>
+            </product>
+          </products>
+        </configuration>
+      </plugin>
+    </plugins>
+  </build>
+</project>

backend/analysisBackendServer/releng/org.dataflowanalysis.standalone.targetplatform/org.dataflowanalysis.standalone.targetplatform.targetplatform.target

@@ -2,6 +2,11 @@
 <?pde version="3.8"?>
 <target name="Target Platform" sequenceNumber="1">
 	<locations>
+		<location includeAllPlatforms="false" includeConfigurePhase="true" includeMode="planner" includeSource="false" type="InstallableUnit">
+			<repository location="file:///mnt/184CCA5A78B43ABB/bachelor/DataFlowAnalysis/releng/org.dataflowanalysis.analysis.updatesite/target/repository"/>
+			<unit id="org.dataflowanalysis.analysis.feature.feature.group" version="0.0.0"/>
+			<unit id="org.dataflowanalysis.converter.feature.feature.group" version="0.0.0"/>
+		</location>
 		<location includeAllPlatforms="false" includeConfigurePhase="true" includeMode="planner" includeSource="false" type="InstallableUnit">
 			<unit id="de.uka.ipd.sdq.identifier.feature.feature.group" version="0.0.0"/>
 			<unit id="org.palladiosimulator.commons.stoex.sdk.feature.group" version="0.0.0"/>
@@ -144,10 +149,8 @@
 		</location>
 		<location includeAllPlatforms="false" includeConfigurePhase="true" includeMode="planner" includeSource="false" type="InstallableUnit">
 			<repository location="https://dataflowanalysis.github.io/updatesite/nightly/dataflowanalysis/"/>
-			<unit id="org.dataflowanalysis.analysis.feature.feature.group" version="0.0.0"/>
-			<unit id="org.dataflowanalysis.converter.feature.feature.group" version="0.0.0"/>
-			<unit id="org.dataflowanalysis.dfd.datadictionary.feature.feature.group" version="0.0.0"/>
-			<unit id="org.dataflowanalysis.dfd.dataflowdiagram.feature.feature.group" version="0.0.0"/>
+			<unit id="org.dataflowanalysis.dfd.datadictionary" version="0.0.0"/>
+			<unit id="org.dataflowanalysis.dfd.dataflowdiagram" version="0.0.0"/>
 		</location>
 	</locations>
 </target>

backend/analysisBackendServer/releng/org.dataflowanalysis.standalone.targetplatform/pom.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>releng-parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>org.dataflowanalysis.standalone.targetplatform</artifactId>
+  <packaging>eclipse-target-definition</packaging>
+</project>

backend/analysisBackendServer/releng/org.dataflowanalysis.standalone.updatesite/pom.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>releng-parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>org.dataflowanalysis.standalone.updatesite</artifactId>
+  <packaging>eclipse-repository</packaging>
+</project>

backend/analysisBackendServer/releng/pom.xml

@@ -0,0 +1,17 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project>
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.dataflowanalysis.standalone</groupId>
+    <artifactId>parent</artifactId>
+    <version>3.0.0-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
+  </parent>
+  <artifactId>releng-parent</artifactId>
+  <packaging>pom</packaging>
+  <modules>
+    <module>org.dataflowanalysis.standalone.targetplatform</module>
+    <module>org.dataflowanalysis.standalone.updatesite</module>
+    <module>org.dataflowanalysis.standalone.product</module>
+  </modules>
+</project>