Security updates

[github-actions]

Security Vulnerability Report

Generated on: 2026-01-23 00:31:35

Summary

Found vulnerabilities in 6 packages requiring updates.

Package Upgrades Overview

Package	Current Version	Recommended Version	Vulnerabilities
biopython	1.85	Unknown	1
filelock	3.20.1	3.20.3	1
nbconvert	7.16.6	Unknown	1
orjson	3.10.18	Unknown	1
pyasn1	0.6.1	0.6.2	1
virtualenv	20.31.2	20.36.1	1

Detailed Vulnerability Information

biopython (v1.85)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-68463		GHSA-x3vf-39hj-gxr4

filelock (v3.20.1)

Vulnerability ID	Fix Versions	Aliases
CVE-2026-22701	3.20.3	GHSA-qmgc-5h2g-mvrw

nbconvert (v7.16.6)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-53000		GHSA-xm59-rqc7-hhvf

orjson (v3.10.18)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-67221		GHSA-hx9q-6w63-j58v

pyasn1 (v0.6.1)

Vulnerability ID	Fix Versions	Aliases
CVE-2026-23490	0.6.2	GHSA-63vm-454h-vhhq

virtualenv (v20.31.2)

Vulnerability ID	Fix Versions	Aliases
CVE-2026-22702	20.36.1	GHSA-597g-3phw-6986

Recommended Actions

1. Review the vulnerability details above.
2. Close and reopen this PR to trigger CI/CD tests.
3. Approve and merge the PR if everything looks good.

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This report was generated automatically. Please verify all upgrades before applying.