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Change field defaults Release Branching #3178: Commit 1e6256d pushed by bbimber
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Improve cleanup of old columns Release Branching #3177: Commit 8c041d9 pushed by bbimber
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More reporting for RunDecoupler Release Branching #3176: Commit 1818264 pushed by bbimber
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Allow tcrClustR to specify a subset of chains Release Branching #3175: Commit 1a1bd94 pushed by bbimber
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Better resume behavior for escape Release Branching #3174: Commit 2950346 pushed by bbimber
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Another bugfix to serialization of Map<Long, Long> Release Branching #3173: Commit 431345b pushed by bbimber
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Bugfix to serialization of Map<Long, Long> Release Branching #3172: Commit 70058a9 pushed by bbimber
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Drop clustalw from main tools script Release Branching #3171: Commit 265ad09 pushed by bbimber
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Also support heatmapGroupingVars for escape Release Branching #3170: Commit fccb116 pushed by bbimber
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Minor behavior change to SEURAT_MAX_THREADS Release Branching #3169: Commit 2893060 pushed by bbimber
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Support additional methods for escape Release Branching #3168: Commit a90d209 pushed by bbimber
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Support inclusion/exclusion lists for ApplyKnownClonotypicData Release Branching #3167: Commit 16309ff pushed by bbimber
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Add VisualizeTcrDistances Release Branching #3166: Commit e6146f0 pushed by bbimber
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Update filename case Release Branching #3165: Commit a9b3e88 pushed by bbimber
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Improve logging in PerformTcrClustering Release Branching #3164: Commit 48bd1eb pushed by bbimber
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Add Single Cell 5' PE V1 Release Branching #3163: Commit be5a839 pushed by bbimber
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Allow for space in HTML Release Branching #3162: Commit 39737a0 pushed by bbimber
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Use LongHashMap to serialize, plus testing Release Branching #3161: Commit 87dffd7 pushed by bbimber
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Use LongHashMap to deserialize Release Branching #3160: Commit 4c1afe3 pushed by bbimber
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Use LongHashMap Release Branching #3159: Commit fdc468e pushed by bbimber
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Bug related to serializing HashMap Release Branching #3158: Commit 32a6d5f pushed by bbimber
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Make SequenceIntegrationTests work across-workbooks (#365) Release Branching #3157: Commit bffe350 pushed by bbimber
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Summarize tcrClustR results Release Branching #3156: Commit 2d1f04d pushed by bbimber
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Add UCell argument Release Branching #3155: Commit a0ef885 pushed by bbimber
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Include SubjectId for file description Release Branching #3154: Commit cd83bdf pushed by bbimber
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