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Merged
iarsene merged 4 commits into from
Apr 24, 2025
Merged

[PWGDQ,PWGEM] Remove unused code #10892

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175f3e2
remove unused aod in dqflow
zjxiongOvO Apr 16, 2025
ad7b55b
remove unused code
zjxiongOvO Apr 17, 2025
bcd41ec
fix MegaLinter
zjxiongOvO Apr 18, 2025
38df196
Fix clang-format
zjxiongOvO Apr 23, 2025
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85 changes: 6 additions & 79 deletions PWGDQ/Core/VarManager.cxx
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Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
// Copyright 2019-2020 CERN and copyright holders of ALICE O2.
// See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
// All rights not expressly granted are reserved.
Expand All @@ -8,8 +8,8 @@
// In applying this license CERN does not waive the privileges and immunities
// granted to it by virtue of its status as an Intergovernmental Organization
// or submit itself to any jurisdiction.
#include <cmath>

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[doc/file] 

Documentation for \author is missing, incorrect or misplaced.

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[doc/file] 

Documentation for \brief is missing, incorrect or misplaced.

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[doc/file] 

Documentation for \file is missing, incorrect or misplaced.
#include <iostream>

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[include-iostream] 

Do not include iostream. Use O2 logging instead.
#include <vector>
#include <map>
#include "PWGDQ/Core/VarManager.h"
Expand All @@ -28,9 +28,6 @@
bool VarManager::fgUsedKF = false;
float VarManager::fgMagField = 0.5;
float VarManager::fgValues[VarManager::kNVars] = {0.0f};
std::map<int, int> VarManager::fgRunMap;
TString VarManager::fgRunStr = "";
std::vector<int> VarManager::fgRunList = {0};
float VarManager::fgCenterOfMassEnergy = 13600; // GeV
float VarManager::fgMassofCollidingParticle = 9.382720; // GeV
float VarManager::fgTPCInterSectorBoundary = 1.0; // cm
Expand Down Expand Up @@ -61,7 +58,7 @@
VarManager::~VarManager() = default;

//__________________________________________________________________
void VarManager::SetVariableDependencies()

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[name/function-variable] 

Use lowerCamelCase for names of functions and variables.
{
//
// Set as used variables on which other variables calculation depends
Expand Down Expand Up @@ -97,7 +94,7 @@
}

//__________________________________________________________________
void VarManager::ResetValues(int startValue, int endValue, float* values)

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[name/function-variable] 

Use lowerCamelCase for names of functions and variables.
{
//
// reset all variables to an "innocent" value
Expand All @@ -105,76 +102,13 @@
if (!values) {
values = fgValues;
}
for (Int_t i = startValue; i < endValue; ++i) {

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[root/entity] 

Replace ROOT entities with equivalents from standard C++ or from O2.
values[i] = -9999.;
}
}

//__________________________________________________________________
void VarManager::SetRunNumbers(int n, int* runs)
{
//
// maps the list of runs such that one can plot the list of runs nicely in a histogram axis
//
for (int i = 0; i < n; ++i) {
fgRunMap[runs[i]] = i + 1;
fgRunStr += Form("%d;", runs[i]);
}
}

//__________________________________________________________________
void VarManager::SetRunNumbers(std::vector<int> runs)
{
//
// maps the list of runs such that one can plot the list of runs nicely in a histogram axis
//
int i = 0;
for (auto run = runs.begin(); run != runs.end(); run++, i++) {
fgRunMap[*run] = i + 1;
fgRunStr += Form("%d;", *run);
}
fgRunList = runs;
}

//__________________________________________________________________
void VarManager::SetDummyRunlist(int InitRunnumber)
{
//
// runlist for the different periods
fgRunList.clear();
fgRunList.push_back(InitRunnumber);
fgRunList.push_back(InitRunnumber + 100);
}

//__________________________________________________________________
int VarManager::GetDummyFirst()
{
//
// Get the fist index of the vector of run numbers
//
return fgRunList[0];
}
//__________________________________________________________________
int VarManager::GetDummyLast()
{
//
// Get the last index of the vector of run numbers
//
return fgRunList[fgRunList.size() - 1];
}
//_________________________________________________________________
float VarManager::GetRunIndex(double Runnumber)
{
//
// Get the index of RunNumber in it's runlist
//
int runNumber = static_cast<int>(Runnumber);
auto runIndex = std::find(fgRunList.begin(), fgRunList.end(), runNumber);
float index = std::distance(fgRunList.begin(), runIndex);
return index;
}
//__________________________________________________________________
void VarManager::SetCollisionSystem(TString system, float energy)

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[name/function-variable] 

Use lowerCamelCase for names of functions and variables.
{
//
// Set the collision system and the center of mass energy
Expand All @@ -191,15 +125,12 @@
}

//__________________________________________________________________
void VarManager::FillEventDerived(float* values)
{
//
// Fill event-wise derived quantities (these are all quantities which can be computed just based on the values already filled in the FillEvent() function)
//
if (fgUsedVars[kRunId]) {
values[kRunId] = (fgRunMap.size() > 0 ? fgRunMap[static_cast<int>(values[kRunNo])] : 0);
}
}
// void VarManager::FillEventDerived(float* values)
// {
// //
// // Fill event-wise derived quantities (these are all quantities which can be computed just based on the values already filled in the FillEvent() function)
// //
// }

//__________________________________________________________________
void VarManager::FillTrackDerived(float* values)
Expand All @@ -223,15 +154,13 @@
//
// Set default variable names
//
for (Int_t ivar = 0; ivar < kNVars; ++ivar) {

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[root/entity] 

Replace ROOT entities with equivalents from standard C++ or from O2.
fgVariableNames[ivar] = "DEFAULT NOT DEFINED";
fgVariableUnits[ivar] = "n/a";
}

fgVariableNames[kRunNo] = "Run number";
fgVariableUnits[kRunNo] = "";
fgVariableNames[kRunId] = "Run number";
fgVariableUnits[kRunId] = "";
fgVariableNames[kBC] = "Bunch crossing";
fgVariableUnits[kBC] = "";
fgVariableNames[kTimeFromSOR] = "time since SOR";
Expand Down Expand Up @@ -1095,8 +1024,6 @@
// Set the variables short names map. This is needed for dynamic configuration via JSON files
fgVarNamesMap["kNothing"] = kNothing;
fgVarNamesMap["kRunNo"] = kRunNo;
fgVarNamesMap["kRunId"] = kRunId;
fgVarNamesMap["kRunIndex"] = kRunIndex;
fgVarNamesMap["kNRunWiseVariables"] = kNRunWiseVariables;
fgVarNamesMap["kTimestamp"] = kTimestamp;
fgVarNamesMap["kTimeFromSOR"] = kTimeFromSOR;
Expand Down
34 changes: 2 additions & 32 deletions PWGDQ/Core/VarManager.h
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Expand Up @@ -175,8 +175,6 @@ class VarManager : public TObject
kNothing = -1,
// Run wise variables
kRunNo = 0,
kRunId,
kRunIndex,
kNRunWiseVariables,

// Event wise variables
Expand Down Expand Up @@ -898,29 +896,6 @@ class VarManager : public TObject
return false;
}

static void SetRunNumbers(int n, int* runs);
static void SetRunNumbers(std::vector<int> runs);
static float GetRunIndex(double);
static void SetDummyRunlist(int InitRunnumber);
static int GetDummyFirst();
static int GetDummyLast();
static int GetDummyNRuns()
{
if (fgRunMap.size() == 0) {
return 101;
} else {
return fgRunMap.size();
}
}
static int GetNRuns()
{
return fgRunMap.size();
}
static TString GetRunStr()
{
return fgRunStr;
}

// Setup the collision system
static void SetCollisionSystem(TString system, float energy);

Expand Down Expand Up @@ -1159,9 +1134,6 @@ class VarManager : public TObject
static void SetVariableDependencies(); // toggle those variables on which other used variables might depend

static float fgMagField;
static std::map<int, int> fgRunMap; // map of runs to be used in histogram axes
static TString fgRunStr; // semi-colon separated list of runs, to be used for histogram axis labels
static std::vector<int> fgRunList; // vector of runs, to be used for histogram axis
static float fgCenterOfMassEnergy; // collision energy
static float fgMassofCollidingParticle; // mass of the colliding particle
static float fgTPCInterSectorBoundary; // TPC inter-sector border size at the TPC outer radius, in cm
Expand All @@ -1172,7 +1144,7 @@ class VarManager : public TObject
static uint64_t fgSOR; // Timestamp for start of run
static uint64_t fgEOR; // Timestamp for end of run

static void FillEventDerived(float* values = nullptr);
// static void FillEventDerived(float* values = nullptr);
static void FillTrackDerived(float* values = nullptr);
template <typename T, typename U, typename V>
static auto getRotatedCovMatrixXX(const T& matrix, U phi, V theta);
Expand Down Expand Up @@ -1442,7 +1414,6 @@ void VarManager::FillBC(T const& bc, float* values)
values[kBCOrbit] = bc.globalBC() % o2::constants::lhc::LHCMaxBunches;
values[kTimestamp] = bc.timestamp();
values[kTimeFromSOR] = (fgSOR > 0 ? (bc.timestamp() - fgSOR) / 60000. : -1.0);
values[kRunIndex] = GetRunIndex(bc.runNumber());
}

template <uint32_t fillMap, typename T>
Expand Down Expand Up @@ -1611,7 +1582,6 @@ void VarManager::FillEvent(T const& event, float* values)

if constexpr ((fillMap & ReducedEvent) > 0) {
values[kRunNo] = event.runNumber();
values[kRunIndex] = GetRunIndex(event.runNumber());
values[kVtxX] = event.posX();
values[kVtxY] = event.posY();
values[kVtxZ] = event.posZ();
Expand Down Expand Up @@ -1903,7 +1873,7 @@ void VarManager::FillEvent(T const& event, float* values)
FillZDC(event, values);
}

FillEventDerived(values);
// FillEventDerived(values);
}

template <uint32_t fillMap, typename TEvent, typename TAssoc, typename TTracks>
Expand Down
8 changes: 0 additions & 8 deletions PWGDQ/TableProducer/tableMaker.cxx
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Expand Up @@ -202,8 +202,6 @@ struct TableMaker {
Configurable<bool> fConfigComputeTPCpostCalib{"cfgTPCpostCalib", false, "If true, compute TPC post-calibrated n-sigmas(electrons, pions, protons)"};
Configurable<bool> fConfigComputeTPCpostCalibKaon{"cfgTPCpostCalibKaon", false, "If true, compute TPC post-calibrated n-sigmas for kaons"};
Configurable<bool> fConfigIsOnlyforMaps{"cfgIsforMaps", false, "If true, run for postcalibration maps only"};
Configurable<bool> fConfigDummyRunlist{"cfgDummyRunlist", false, "If true, use dummy runlist"};
Configurable<int> fConfigInitRunNumber{"cfgInitRunNumber", 543215, "Initial run number used in run by run checks"};
Configurable<bool> fPropMuon{"cfgPropMuon", false, "Propgate muon tracks through absorber"};
Configurable<std::string> geoPath{"geoPath", "GLO/Config/GeometryAligned", "Path of the geometry file"};
Configurable<std::string> grpmagPath{"grpmagPath", "GLO/Config/GRPMagField", "CCDB path of the GRPMagField object"};
Expand Down Expand Up @@ -329,10 +327,6 @@ struct TableMaker {
}
}

if (fConfigDummyRunlist) {
VarManager::SetDummyRunlist(fConfigInitRunNumber);
}

DefineHistograms(histClasses); // define all histograms
VarManager::SetUseVars(fHistMan->GetUsedVars()); // provide the list of required variables so that VarManager knows what to fill
fOutputList.setObject(fHistMan->GetMainHistogramList());
Expand Down Expand Up @@ -436,7 +430,6 @@ struct TableMaker {
VarManager::fgValues[VarManager::kRunNo] = bc.runNumber();
VarManager::fgValues[VarManager::kBC] = bc.globalBC();
VarManager::fgValues[VarManager::kTimestamp] = bc.timestamp();
VarManager::fgValues[VarManager::kRunIndex] = VarManager::GetRunIndex(bc.runNumber());
VarManager::FillEvent<TEventFillMap>(collision); // extract event information and place it in the fValues array
if (fDoDetailedQA) {
fHistMan->FillHistClass("Event_BeforeCuts", VarManager::fgValues);
Expand Down Expand Up @@ -910,7 +903,6 @@ struct TableMaker {
VarManager::fgValues[VarManager::kRunNo] = bc.runNumber();
VarManager::fgValues[VarManager::kBC] = bc.globalBC();
VarManager::fgValues[VarManager::kTimestamp] = bc.timestamp();
VarManager::fgValues[VarManager::kRunIndex] = VarManager::GetRunIndex(bc.runNumber());
VarManager::FillEvent<TEventFillMap>(collision); // extract event information and place it in the fValues array
if (fDoDetailedQA) {
fHistMan->FillHistClass("Event_BeforeCuts", VarManager::fgValues);
Expand Down
6 changes: 0 additions & 6 deletions PWGDQ/TableProducer/tableMaker_withAssoc.cxx
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Expand Up @@ -233,8 +233,6 @@ struct TableMaker {
Configurable<bool> fConfigComputeTPCpostCalibKaon{"cfgTPCpostCalibKaon", false, "If true, compute TPC post-calibrated n-sigmas for kaons"};
Configurable<bool> fConfigIsOnlyforMaps{"cfgIsforMaps", false, "If true, run for postcalibration maps only"};
Configurable<bool> fConfigSaveElectronSample{"cfgSaveElectronSample", false, "If true, only save electron sample"};
Configurable<bool> fConfigDummyRunlist{"cfgDummyRunlist", false, "If true, use dummy runlist"};
Configurable<int> fConfigInitRunNumber{"cfgInitRunNumber", 543215, "Initial run number used in run by run checks"};
} fConfigPostCalibTPC;

struct : ConfigurableGroup {
Expand Down Expand Up @@ -397,10 +395,6 @@ struct TableMaker {
}
}

if (fConfigPostCalibTPC.fConfigDummyRunlist) {
VarManager::SetDummyRunlist(fConfigPostCalibTPC.fConfigInitRunNumber);
}

DefineHistograms(histClasses); // define all histograms
// Additional histogram via the JSON configurable
TString addHistsStr = fConfigHistOutput.fConfigAddJSONHistograms.value;
Expand Down
26 changes: 11 additions & 15 deletions PWGDQ/Tasks/dqEfficiency_withAssoc.cxx
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Expand Up @@ -18,6 +18,7 @@
#include <map>
#include <string>
#include <memory>
#include <utility>
#include <TH1F.h>
#include <TH3F.h>
#include <THashList.h>
Expand Down Expand Up @@ -394,8 +395,6 @@ struct AnalysisTrackSelection {
Configurable<int64_t> fConfigNoLaterThan{"ccdb-no-later-than", std::chrono::duration_cast<std::chrono::milliseconds>(std::chrono::system_clock::now().time_since_epoch()).count(), "latest acceptable timestamp of creation for the object"};
Configurable<bool> fConfigComputeTPCpostCalib{"cfgTPCpostCalib", false, "If true, compute TPC post-calibrated n-sigmas"};
Configurable<std::string> grpmagPath{"grpmagPath", "GLO/Config/GRPMagField", "CCDB path of the GRPMagField object"};
Configurable<bool> fConfigDummyRunlist{"cfgDummyRunlist", false, "If true, use dummy runlist"};
Configurable<int> fConfigInitRunNumber{"cfgInitRunNumber", 543215, "Initial run number used in run by run checks"};

Configurable<std::string> fConfigMCSignals{"cfgTrackMCSignals", "", "Comma separated list of MC signals"};
Configurable<std::string> fConfigMCSignalsJSON{"cfgTrackMCsignalsJSON", "", "Additional list of MC signals via JSON"};
Expand Down Expand Up @@ -433,7 +432,7 @@ struct AnalysisTrackSelection {
if (addTrackCutsStr != "") {
std::vector<AnalysisCut*> addTrackCuts = dqcuts::GetCutsFromJSON(addTrackCutsStr.Data());
for (auto& t : addTrackCuts) {
fTrackCuts.push_back((AnalysisCompositeCut*)t);
fTrackCuts.push_back(reinterpret_cast<AnalysisCompositeCut*>(t));
}
}
VarManager::SetUseVars(AnalysisCut::fgUsedVars); // provide the list of required variables so that VarManager knows what to fill
Expand Down Expand Up @@ -493,9 +492,6 @@ struct AnalysisTrackSelection {
fOutputList.setObject(fHistMan->GetMainHistogramList());
}

if (fConfigDummyRunlist) {
VarManager::SetDummyRunlist(fConfigInitRunNumber);
}
if (fConfigComputeTPCpostCalib) {
fCCDB->setURL(fConfigCcdbUrl.value);
fCCDB->setCaching(true);
Expand Down Expand Up @@ -760,7 +756,7 @@ struct AnalysisMuonSelection {
if (addCutsStr != "") {
std::vector<AnalysisCut*> addCuts = dqcuts::GetCutsFromJSON(addCutsStr.Data());
for (auto& t : addCuts) {
fMuonCuts.push_back((AnalysisCompositeCut*)t);
fMuonCuts.push_back(reinterpret_cast<AnalysisCompositeCut*>(t));
}
}
VarManager::SetUseVars(AnalysisCut::fgUsedVars); // provide the list of required variables so that VarManager knows what to fill
Expand Down Expand Up @@ -2203,7 +2199,7 @@ struct AnalysisAsymmetricPairing {
if (addPairCutsStr != "") {
std::vector<AnalysisCut*> addPairCuts = dqcuts::GetCutsFromJSON(addPairCutsStr.Data());
for (auto& t : addPairCuts) {
fPairCuts.push_back((AnalysisCompositeCut*)t);
fPairCuts.push_back(reinterpret_cast<AnalysisCompositeCut*>(t));
cutNamesStr += Form(",%s", t->GetName());
}
}
Expand Down Expand Up @@ -3290,7 +3286,7 @@ struct AnalysisDileptonTrack {
// loop over all the upstream cuts and make a bit mask for the track cuts specified in this task
for (int icut = 0; icut < cfgTrackSelection_objArrayTrackCuts->GetEntries(); icut++) {
if (cfgDileptonTrack_objArrayTrackCuts->FindObject(cfgTrackSelection_objArrayTrackCuts->At(icut)->GetName())) {
fTrackCutBitMap |= (uint32_t(1) << icut);
fTrackCutBitMap |= (static_cast<uint32_t>(1) << icut);
}
}
// finally, store the total number of upstream tasks, for easy access
Expand Down Expand Up @@ -3358,7 +3354,7 @@ struct AnalysisDileptonTrack {
for (int iCutTrack = 0; iCutTrack < fNCuts; iCutTrack++) {

// here we check that this track cut is one of those required to associate with the dileptons
if (!(fTrackCutBitMap & (uint32_t(1) << iCutTrack))) {
if (!(fTrackCutBitMap & (static_cast<uint32_t>(1) << iCutTrack))) {
continue;
}

Expand Down Expand Up @@ -3593,13 +3589,13 @@ struct AnalysisDileptonTrack {
// loop over specified track cuts (the tracks to be combined with the dileptons)
for (int iTrackCut = 0; iTrackCut < fNCuts; iTrackCut++) {

if (!(trackSelection & (uint32_t(1) << iTrackCut))) {
if (!(trackSelection & (static_cast<uint32_t>(1) << iTrackCut))) {
continue;
}

fHistMan->FillHistClass(Form("DileptonTrack_%s_%s", fTrackCutNames[icut].Data(), fTrackCutNames[iTrackCut].Data()), fValuesHadron);
for (uint32_t isig = 0; isig < fRecMCSignals.size(); isig++) {
if (mcDecision & (uint32_t(1) << isig)) {
if (mcDecision & (static_cast<uint32_t>(1) << isig)) {
fHistMan->FillHistClass(Form("DileptonTrackMCMatched_%s_%s_%s", fTrackCutNames[icut].Data(), fTrackCutNames[iTrackCut].Data(), fRecMCSignals[isig]->GetName()), fValuesHadron);
}
}
Expand All @@ -3609,7 +3605,7 @@ struct AnalysisDileptonTrack {
if (dilepton.commonFilterMap_bit(fCommonTrackCutMap[iCommonCut])) {
fHistMan->FillHistClass(Form("DileptonTrack_%s_%s_%s", fTrackCutNames[icut].Data(), fCommonPairCutNames[iCommonCut].Data(), fTrackCutNames[iTrackCut].Data()), fValuesHadron);
for (uint32_t isig = 0; isig < fRecMCSignals.size(); isig++) {
if (mcDecision & (uint32_t(1) << isig)) {
if (mcDecision & (static_cast<uint32_t>(1) << isig)) {
fHistMan->FillHistClass(Form("DileptonTrackMCMatched_%s_%s_%s_%s", fTrackCutNames[icut].Data(), fCommonPairCutNames[iCommonCut].Data(), fTrackCutNames[iTrackCut].Data(), fRecMCSignals[isig]->GetName()), fValuesHadron);
}
}
Expand All @@ -3619,15 +3615,15 @@ struct AnalysisDileptonTrack {
if (dilepton.pairFilterMap_bit(iPairCut)) {
fHistMan->FillHistClass(Form("DileptonTrack_%s_%s_%s", fTrackCutNames[icut].Data(), fPairCutNames[iPairCut].Data(), fTrackCutNames[iTrackCut].Data()), fValuesHadron);
for (uint32_t isig = 0; isig < fRecMCSignals.size(); isig++) {
if (mcDecision & (uint32_t(1) << isig)) {
if (mcDecision & (static_cast<uint32_t>(1) << isig)) {
fHistMan->FillHistClass(Form("DileptonTrackMCMatched_%s_%s_%s_%s", fTrackCutNames[icut].Data(), fPairCutNames[iPairCut].Data(), fTrackCutNames[iTrackCut].Data(), fRecMCSignals[isig]->GetName()), fValuesHadron);
}
}
for (int iCommonCut = 0; iCommonCut < fNCommonTrackCuts; iCommonCut++) {
if (dilepton.commonFilterMap_bit(fCommonTrackCutMap[iCommonCut])) {
fHistMan->FillHistClass(Form("DileptonTrack_%s_%s_%s_%s", fTrackCutNames[icut].Data(), fCommonPairCutNames[iCommonCut].Data(), fPairCutNames[iPairCut].Data(), fTrackCutNames[iTrackCut].Data()), fValuesHadron);
for (uint32_t isig = 0; isig < fRecMCSignals.size(); isig++) {
if (mcDecision & (uint32_t(1) << isig)) {
if (mcDecision & (static_cast<uint32_t>(1) << isig)) {
fHistMan->FillHistClass(Form("DileptonTrackMCMatched_%s_%s_%s_%s_%s", fTrackCutNames[icut].Data(), fCommonPairCutNames[iCommonCut].Data(), fPairCutNames[iPairCut].Data(), fTrackCutNames[iTrackCut].Data(), fRecMCSignals[isig]->GetName()), fValuesHadron);
}
}
Expand Down
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