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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -11,7 +11,7 @@ kernelspec:
1111
1212(sec_completing_forward_simulations)=
1313
14- # Recapitation: completing a forward simulation
14+ # Recapitating a forward simulation
1515
1616The `` msprime `` simulator generates tree sequences using the
1717backward-in-time coalescent model. But it is also possible to output tree sequences
@@ -178,7 +178,7 @@ they may cause problems:
178178 sequence, having these unary edges and redundant nodes will slightly
179179 inflate the values.
1801802 . If you are computing the overall tree "height" by taking the time of the
181- root node, you may overestimate the height because there is a unary edge
181+ root node, you may overestimate the height if there is a unary edge
182182 above the "real" root (this would happen if one of the trees had already
183183 coalesced in the forward-time simulation).
184184
@@ -188,7 +188,7 @@ computed tree sequence which is easily done using the
188188
189189``` {code-cell} ipython3
190190final_ts = coalesced_ts.simplify()
191- coalesced_ts .draw_svg()
191+ final_ts .draw_svg()
192192```
193193
194194This final tree sequence is topologically identical to the original tree sequence,
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