Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads

all methods related to Enterobase

Python implementation of the card game Hearts

Landscape Ecosystem Modelling in R

Automated pipeline for whole bacterial genome analysis based on snakemake

BASIC POKEMON CARD GAME WITH JAVA

A pipeline based on unmapped reads, which combines different tools for extends contigs and closing gaps present in the genomes

New card game based on Macau

A popular four person card game implemented in Rust.

A workflow for identifying novel viruses in Virtool

🦇🧫📊Study on bat gut shotgun metagenomics

This application is a hub access the card games that we are developing: Spades and Euchre. The application will allow the user to play different card games while keeping track of the score, ranking players against each other

Custom Nextflow scripts for microbiome assembly and AntiSMASH BGC analyses. Based around microbiome assemblers: Megahit & MetaSpades

Custom Bash Shell scripts for use with AntiSMASH and Biosynthetic MetaSpades data outputs (fasta/GenBank). Scripts carry out file management, data parsing and data QC

[a.a. 23/24] M. Gambardella

Algoritmos y Programación I - FIUBA

The repository contains a comprehensive pipeline for genome assembly and quality assessment, designed for genomic data analysis. It integrates various bioinformatics tools for accurate genome assembly.

A bioinformatics workflow for novel bat coronaviruses discovery.

Scripts for de novo genome assembly

Complete pipeline that mirrors the manuscript: reference based assembly with depth masking, de novo checks, phylogeny with configurable models including ModelFinder, and targeted mutation analysis for G and F versus NC_038235.1 and NC_001781.1. Includes CI and environment files for easy setup.