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NAMESPACE
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executable file
·47 lines (46 loc) · 1.24 KB
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# Generated by roxygen2: do not edit by hand
export(createExampleData)
export(daHeatmapLogFC)
export(daLogRatioPlot)
export(daMAplot)
export(daScatterPlot)
export(daSignificantGenesBarplot)
export(daUpset)
export(daVolcanoPlot)
export(daWaterfallPlot)
export(getSEModel)
import(ggplot2)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,estimateDisp)
importFrom(edgeR,filterByExpr)
importFrom(edgeR,glmQLFTest)
importFrom(edgeR,glmQLFit)
importFrom(ggh4x,facet_nested_wrap)
importFrom(ggh4x,guide_axis_nested)
importFrom(ggplot2,expansion)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,n2mfrow)
importFrom(grDevices,pdf)
importFrom(grDevices,png)
importFrom(limma,contrasts.fit)
importFrom(limma,decideTests)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,topTable)
importFrom(limma,voom)
importFrom(plyr,ddply)
importFrom(plyr,dlply)
importFrom(plyr,rbind.fill)
importFrom(stats,as.dendrogram)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,order.dendrogram)
importFrom(stats,reorder)
importFrom(stats,setNames)
importFrom(utils,combn)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,read.table)