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Add new module: pridepy/downloadfile#11753

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jonasscheid wants to merge 1 commit into
nf-core:masterfrom
jonasscheid:pridepy-downloadfile
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Add new module: pridepy/downloadfile#11753
jonasscheid wants to merge 1 commit into
nf-core:masterfrom
jonasscheid:pridepy-downloadfile

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PR checklist

New module pridepy/downloadfile — downloads a single file from the PRIDE Archive by name using pridepy.

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
@jonasscheid jonasscheid force-pushed the pridepy-downloadfile branch from f85037c to 90404cb Compare May 22, 2026 22:37
@jonasscheid jonasscheid marked this pull request as ready for review May 22, 2026 23:00
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