Skip to content

Implement qpx as output for both TMT and LFQ #705

@ypriverol

Description

@ypriverol

We want to remove the mzTab output from proteomicsLFQ and ProteinQuantifier in favor of qpx. These are the steps:

  • Test the current qpx implementation for both pipelines in OpenMS.
  • Refine qpx to convert from OpenMS + quantms (TMT & proteomicsLFQ) -> qpx
  • Check that all the PSMs features, metadata , versions, and proteins are released.
  • Release OpenMS binary version
  • Perform a PR.

This feature is a precondition for releasing the next version of quantms.

Metadata

Metadata

No fields configured for Feature.

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions