eddy/pyproject.toml at master · PlanetFormationLab/eddy · GitHub

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[build-system]
requires = ["setuptools>=61", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "astro-eddy"
version = "3.0.1"
authors = [
    { name = "Richard Teague", email = "rteague@mit.edu" }
]
description = "Tools to study the dynamics of protoplanetary disks."
readme = "README.md"
license = { text = "MIT" }
requires-python = ">=3.10"
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Astronomy",
]
dependencies = [
    "scipy>=1.7",
    "numpy>=2.0",
    "jax>=0.4",
    "jaxlib>=0.4",
    "tinygp>=0.3",
    "matplotlib>=3",
    "emcee>=3",
    "corner>=2",
    "zeus-mcmc>=2",
    "numpyro>=0.15",
    "bettermoments>=1.9.6",
]

[project.optional-dependencies]
test = [
    "pytest>=7",
]
docs = [
    "sphinx>=1.7.5",
    "jupyter",
    "nbsphinx",
    "pygments>=2.4.1",
    "sphinx_rtd_theme",
]

[project.urls]
Homepage = "https://github.com/PlanetFormationLab/eddy"
Documentation = "https://eddy.readthedocs.io"
Repository = "https://github.com/PlanetFormationLab/eddy"
Issues = "https://github.com/PlanetFormationLab/eddy/issues"

[tool.pytest.ini_options]
testpaths = ["tests"]
markers = [
    "slow: marks tests that take more than a few seconds (deselect with '-m \"not slow\"')",
]

[tool.ruff]
target-version = "py310"
# Match the loose long-line style of the existing astronomy codebase
# rather than blindly hard-wrapping at 79 chars. 120 accommodates the
# one LaTeX equation in `rotationmap.fit_annuli`'s docstring without
# special-casing.
line-length = 120
extend-exclude = [
    "docs/tutorials",  # executed notebooks have generated lines longer than the limit
    "paper",
]

[tool.ruff.lint]
# Only the truly fundamental checks: real bugs (F), basic pycodestyle
# (E/W). Import sorting, naming, and stylistic preferences are
# intentionally not enabled — they would generate noise without
# substantive value for a small scientific package.
select = ["E", "F", "W"]

[tool.ruff.lint.per-file-ignores]
# eddy/__init__.py deliberately configures JAX (jax.config.update) before
# importing the submodules; that triggers E402 (module-level import not
# at top of file) which is the desired idiom here, not a bug.
"eddy/__init__.py" = ["E402"]

[tool.setuptools.packages.find]
where = ["."]
include = ["eddy*"]

[tool.setuptools.package-data]
eddy = ["*.yml"]