Understanding the TIPC Output & Documentation

[joreynajr]

Hi MPE Lab,

I managed to run TIPC but I don't fully understand the output and how to generate figures like those made within your paper. Would you be able to provide better documentation describing all the files generated and how I can use them?

Many Thanks,

Joaquin

[joreynajr]

This is the output I have:
.
├── No_effective_vs_outlier_clusters_by_hexlen_N_k.pdf
├── TIPC_hexLen40
│   ├── TIPC_counts.Rda
│   ├── TIPC_metrics.Rda
│   ├── tessellated_res.Rda
│   └── test
│   ├── cluster_item_consensus_plots
│   │   └── icl.pdf
│   ├── consensus.pdf
│   ├── k10
│   │   └── cluster_no_k10.csv
│   ├── k11
│   │   └── cluster_no_k11.csv
│   ├── k12
│   │   └── cluster_no_k12.csv
│   ├── k13
│   │   └── cluster_no_k13.csv
│   ├── k2
│   │   └── cluster_no_k2.csv
│   ├── k3
│   │   └── cluster_no_k3.csv
│   ├── k4
│   │   └── cluster_no_k4.csv
│   ├── k5
│   │   └── cluster_no_k5.csv
│   ├── k6
│   │   └── cluster_no_k6.csv
│   ├── k7
│   │   └── cluster_no_k7.csv
│   ├── k8
│   │   ├── cluster_no_k8.csv
│   │   ├── heatmap_TIPCmetrics_raw.pdf
│   │   └── heatmap_TIPCmetrics_scaled.pdf
│   └── k9
│   └── cluster_no_k9.csv
├── TIPCmetric_vs_direction_at40_50_60.pdf
├── TIPCmetric_vs_direction_at40_50_60_percentage.pdf
├── TIPCmetric_vs_hexLen40_50_60.pdf
├── TIPCmetric_vs_hexLen40_50_60_normalized.pdf
└── total_no_unclassifed_cases_by_hexlen_N_k.pdf

46 directories, 64 files