replace all references to project_name parameter with container_path (#75)

* Update README.md

* Update README.md

* Update query_examples.py

example data referenced in comment does not exist

* Update query_examples.py

replace project_name references with container_path

* Update sampleset_domain_example.py

replace project_name references with container_path

* Update security_example.py

replace project_name reference with container_path

* Update storage.md

replace project_name reference with container_path

* Update experiment_example.py

replace project_name with container_path

* Update experiment_platemetadata_example.py

replace project_name with container_path

* Update domain_example.py

replace project_name with container_path

* Update api_wrapper.md

replace references to projects with container path

* Update README.md

Author: jryurkanin

README.md

@@ -93,12 +93,15 @@ from labkey.api_wrapper import APIWrapper
 
 print("Create an APIWrapper")
 labkey_server = 'localhost:8080'
-project_name = 'ModuleAssayTest'  # Project folder name
+container_path = 'Tutorials/HIV Study'  # in this example, Tutorials is a project name and HIV study is a subfolder under it.
 contextPath = 'labkey'
 schema = 'core'
 table = 'Users'
-api = APIWrapper(labkey_server, project_name, contextPath, use_ssl=False)
 
+# Note: If developing against localhost with https disabled, set use_ssl=False below
+api = APIWrapper(labkey_server, container_path, contextPath)
+
+# Makes an API request to https://www.example.com/labkey/tutorials/hiv%20study/query-getQuery.api
 result = api.query.select_rows(schema, table)
 
 if result is not None:

docs/api_wrapper.md

@@ -52,7 +52,7 @@ from labkey.api_wrapper import APIWrapper
 
 print("Create an APIWrapper")
 labkey_server = 'www.example.com'
-container_path = 'ModuleAssayTest'  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 contextPath = 'labkey'
 schema = 'core'
 table = 'Users'

docs/storage.md

@@ -31,9 +31,9 @@ The specific set of props will differ for each storage item type:
 from labkey.api_wrapper import APIWrapper
 
 labkey_server = "localhost:8080"
-project_name = "FM API Test"  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 contextPath = "labkey"
-api = APIWrapper(labkey_server, project_name, contextPath, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, contextPath, use_ssl=False)
 
 
 ###############
@@ -130,4 +130,4 @@ if result is not None:
 else:
     print("Delete freezer: no results returned")
     exit()
-```
+```

samples/domain_example.py

@@ -18,9 +18,9 @@
 from labkey.query import QueryFilter
 
 labkey_server = "localhost:8080"
-project_name = "Study"  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 context_path = "labkey"
-api = APIWrapper(labkey_server, project_name, context_path, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, context_path, use_ssl=False)
 
 ###################
 # Create a list domain

samples/experiment_example.py

@@ -17,9 +17,9 @@
 from labkey.experiment import Batch, Run
 
 labkey_server = "localhost:8080"
-project_name = "ModulesAssayTest"  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 context_path = "labkey"
-api = APIWrapper(labkey_server, project_name, context_path, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, context_path, use_ssl=False)
 
 assay_id = 3315  # provide one from your server
 

samples/experiment_platemetadata_example.py

@@ -17,9 +17,9 @@
 from labkey.experiment import Batch, Run
 
 labkey_server = "localhost:8080"
-project_name = "assays"  # Project folder name
+container_path = 'Tutorials/assay' # Full project/folder container path
 context_path = "labkey"
-api = APIWrapper(labkey_server, project_name, context_path, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, context_path, use_ssl=False)
 assay_id = 310  # provide one from your server
 
 ###################

samples/query_examples.py

@@ -15,10 +15,6 @@
 #
 """
 Examples using the Query.py API
-
-Sample data from the New Study tutorial on labkey.org:
-    https://www.labkey.org/Documentation/wiki-page.view?name=studySetupManual
-
 """
 from labkey.api_wrapper import APIWrapper
 from labkey.exceptions import (
@@ -34,9 +30,9 @@
 
 print("Create a server context")
 labkey_server = "localhost:8080"
-project_name = "ModuleAssayTest"  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 context_path = "labkey"
-api = APIWrapper(labkey_server, project_name, context_path, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, context_path, use_ssl=False)
 
 schema = "lists"
 table = "Demographics"
@@ -80,7 +76,7 @@
     print("Caught bad schema")
 
 # catch SSL error
-ssl_api = APIWrapper(labkey_server, project_name, context_path, use_ssl=True)
+ssl_api = APIWrapper(labkey_server, container_path, context_path, use_ssl=True)
 try:
     result = ssl_api.query.select_rows(schema, table)
     print(result)
@@ -89,15 +85,15 @@
 
 
 # catch bad context path
-bad_api = APIWrapper(labkey_server, project_name, "", use_ssl=False)
+bad_api = APIWrapper(labkey_server, container_path, "", use_ssl=False)
 try:
     result = bad_api.query.select_rows(schema, table)
     print(result)
 except ServerNotFoundError:
     print("Caught context path")
 
 # catch bad folder path error
-bad_api = APIWrapper(labkey_server, "bad_project_name", context_path, use_ssl=False)
+bad_api = APIWrapper(labkey_server, "bad_container_path", context_path, use_ssl=False)
 try:
     result = bad_api.query.select_rows(schema, table)
     print(result)

samples/sampleset_domain_example.py

@@ -1,9 +1,9 @@
 from labkey.api_wrapper import APIWrapper
 
 labkey_server = "localhost:8080"
-project_name = "MySamples"  # Project folder name
+container_path = "Tutorials/MySamples"  # Full project/folder container path
 context_path = "labkey"
-api = APIWrapper(labkey_server, project_name, context_path, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, context_path, use_ssl=False)
 
 ###################
 # Create a SampleSet domain

samples/security_example.py

@@ -17,9 +17,9 @@
 from labkey.exceptions import ServerNotFoundError
 
 labkey_server = "localhost:8080"
-project_name = "Home"  # Project folder name
+container_path = 'Tutorials/HIV Study' # Full project/folder container path
 contextPath = "labkey"
-api = APIWrapper(labkey_server, project_name, contextPath, use_ssl=False)
+api = APIWrapper(labkey_server, container_path, contextPath, use_ssl=False)
 
 
 ###############