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1 parent c413fbc commit ea6630aCopy full SHA for ea6630a
SequenceAnalysis/pipeline_code/sequence_tools_install.sh
@@ -872,7 +872,8 @@ then
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else
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CUTADAPT_BRANCH=v4.0
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$PIP_EXE install --target ${LKTOOLS_DIR}/cutadapt_pip git+https://github.com/marcelm/cutadapt.git@${CUTADAPT_BRANCH}
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- ln -s ${LKTOOLS_DIR}/cutadapt_pip/bin/cutadapt ${LKTOOLS_DIR}/cutadapt
+ cd ${LKTOOLS_DIR}
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+ ln -s ./cutadapt_pip/bin/cutadapt cutadapt
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fi
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echo "Already installed"
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