Update param defaults

Author: bbimber

singlecell/api-src/org/labkey/api/singlecell/CellHashingService.java

@@ -132,7 +132,7 @@ public static CellHashingService.CellHashingParameters createFromStep(SequenceOu
             ret.callerDisagreementThreshold = step.getProvider().getParameterByName("callerDisagreementThreshold").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Double.class, null);
             ret.doTSNE = step.getProvider().getParameterByName("doTSNE").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Boolean.class, false);
             ret.doNotAllowResume = step.getProvider().getParameterByName("doNotAllowResume").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Boolean.class, false);
-            ret.retainRawCountFile = step.getProvider().getParameterByName("retainRawCountFile").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Boolean.class, true);
+            ret.retainRawCountFile = step.getProvider().getParameterByName("retainRawCountFile").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Boolean.class, false);
             ret.failIfUnexpectedHtosFound = step.getProvider().getParameterByName("failIfUnexpectedHtosFound").extractValue(ctx.getJob(), step.getProvider(), step.getStepIdx(), Boolean.class, true);
             ret.htoReadset = htoReadset;
             ret.parentReadset = parentReadset;
@@ -177,7 +177,7 @@ public static CellHashingParameters createFromJson(BARCODE_TYPE type, File webse
             ret.callerDisagreementThreshold = params.get("callerDisagreementThreshold") == null ? null : params.getDouble("callerDisagreementThreshold");
             ret.doTSNE = params.optBoolean("doTSNE", false);
             ret.doNotAllowResume = params.optBoolean("doNotAllowResume", false);
-            ret.retainRawCountFile = params.optBoolean("retainRawCountFile", true);
+            ret.retainRawCountFile = params.optBoolean("retainRawCountFile", false);
             ret.failIfUnexpectedHtosFound = params.optBoolean("failIfUnexpectedHtosFound", true);
             ret.htoReadset = htoReadset;
             ret.parentReadset = parentReadset;