Build fixes

bbimber · bbimber · commit d98b42fd9108 · 2025-11-06T05:28:05.000-08:00
diff --git a/singlecell/src/org/labkey/singlecell/run/NimbleAlignmentStep.java b/singlecell/src/org/labkey/singlecell/run/NimbleAlignmentStep.java
@@ -199,7 +199,7 @@ public void init(SequenceAnalysisJobSupport support) throws PipelineJobException
         }
 
         // Try to find 10x barcodes:
-        HashMap<Integer, Integer> readsetToBarcodes = new HashMap<>();
+        HashMap<Long, Long> readsetToBarcodes = new HashMap<>();
         for (Readset rs : support.getCachedReadsets())
         {
             ExpData f = findCellBarcodeFiles(rs);

Original file line number	Diff line number	Diff line change
`@@ -199,7 +199,7 @@ public void init(SequenceAnalysisJobSupport support) throws PipelineJobException`
`199`	`199`	`}`
`200`	`200`
`201`	`201`	`// Try to find 10x barcodes:`
`202`		`- HashMap<Integer, Integer> readsetToBarcodes = new HashMap<>();`
	`202`	`+ HashMap<Long, Long> readsetToBarcodes = new HashMap<>();`
`203`	`203`	`for (Readset rs : support.getCachedReadsets())`
`204`	`204`	`{`
`205`	`205`	`ExpData f = findCellBarcodeFiles(rs);`