Skip to content

Commit 9c647c6

Browse files
committed
Fall back to older cutadapt version when using python 2.x
1 parent 1b1d78b commit 9c647c6

File tree

1 file changed

+1
-1
lines changed

1 file changed

+1
-1
lines changed

SequenceAnalysis/pipeline_code/sequence_tools_install.sh

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -856,7 +856,7 @@ then
856856
PIP_VERSION=`pip -V | cut -d '(' -f 2 | sed 's/python //' | cut -c 1 2>1`
857857

858858
if [[ $PIP_VERSION == '2' ]];then
859-
CUTADAPT_BRANCH='v1.18'
859+
CUTADAPT_BRANCH='v1.3'
860860
fi
861861

862862
pip install --target ${LKTOOLS_DIR}/cutadapt_pip git+https://github.com/marcelm/cutadapt.git@${CUTADAPT_BRANCH}

0 commit comments

Comments
 (0)