Add null check

bbimber · bbimber · commit 14ed86a7affc · 2025-09-22T06:12:13.000-07:00
diff --git a/singlecell/src/org/labkey/singlecell/pipeline/singlecell/VireoHandler.java b/singlecell/src/org/labkey/singlecell/pipeline/singlecell/VireoHandler.java
@@ -72,7 +72,7 @@ public boolean doSplitJobs()
     @Override
     public boolean canProcess(SequenceOutputFile o)
     {
-        return CellRangerGexCountStep.LOUPE_CATEGORY.equals(o.getCategory()) & o.getFile().getName().endsWith("cloupe.cloupe");
+        return CellRangerGexCountStep.LOUPE_CATEGORY.equals(o.getCategory()) & o.getFile() != null & o.getFile().getName().endsWith("cloupe.cloupe");
     }
 
     @Override

Original file line number	Diff line number	Diff line change
`@@ -72,7 +72,7 @@ public boolean doSplitJobs()`
`72`	`72`	`@Override`
`73`	`73`	`public boolean canProcess(SequenceOutputFile o)`
`74`	`74`	`{`
`75`		`- return CellRangerGexCountStep.LOUPE_CATEGORY.equals(o.getCategory()) & o.getFile().getName().endsWith("cloupe.cloupe");`
	`75`	`+ return CellRangerGexCountStep.LOUPE_CATEGORY.equals(o.getCategory()) & o.getFile() != null & o.getFile().getName().endsWith("cloupe.cloupe");`
`76`	`76`	`}`
`77`	`77`
`78`	`78`	`@Override`