Expand StudyMetadata cohorts

Author: bbimber

singlecell/resources/chunks/StudyMetadata.R

@@ -32,6 +32,8 @@ for (datasetId in names(seuratObjects)) {
         seuratObj <- Rdiscvr::ApplyEC_Metadata(seuratObj, errorIfUnknownIdsFound = errorIfUnknownIdsFound)
     } else if (studyName == 'PPG_Stims') {
         seuratObj <- Rdiscvr::ApplyPPG_Stim_Metadata(seuratObj, errorIfUnknownIdsFound = errorIfUnknownIdsFound)
+    ] else if (studyName == 'IMPAC_TB_Human') {
+        seuratObj <- Rdiscvr::ApplyIMPAC_TB_Human_Metadata(seuratObj, errorIfUnknownIdsFound = errorIfUnknownIdsFound)
     } else {
         stop(paste0('Unknown study: ', studyName))
     }

singlecell/src/org/labkey/singlecell/pipeline/singlecell/StudyMetadata.java

@@ -24,7 +24,7 @@ public Provider()
                     {{
                         put("multiSelect", false);
                         put("allowBlank", false);
-                        put("storeValues", "PC475;PC531;TB;Malaria;AcuteNx;EC;PPG_Stims");
+                        put("storeValues", "PC475;PC531;TB;Malaria;AcuteNx;EC;PPG_Stims;IMPAC_TB_Human");
                         put("delimiter", ";");
                     }}, null, null, false, false),
                     SeuratToolParameter.create("errorIfUnknownIdsFound", "Error If Unknown Ids Found", "If true, the job will fail if the seurat object contains ID not present in the metadata", "checkbox", null, true)